RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 BHLHE23Q8NDY6 225 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 TMEM104Q8NE00 496 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 CPT1CQ8TCG5 803 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 DDIT4LQ96D03 193 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 ARHGAP5-AS1Q96IT6 56 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 SLC35B3Q9H1N7 401 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 KCNJ16Q9NPI9 418 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 ALKBH4Q9NXW9 302 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 B4GALT7Q9UBV7 327 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 CLN5O75503 358 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 CBR3O75828 277 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 C1QL1O75973 258 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 HOXB5P09067 269 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 CELA3AP09093 270 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 SLC2A1P11166 492 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 HLA-DOBP13765 273 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 GLRA1P23415 457 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 CTSSP25774 331 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 PTGER4P35408 488 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 HTR5AP47898 357 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 SLC35A1P78382 337 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 FMODQ06828 376 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 CHRFAM7AQ494W8 412 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 MIDNQ504T8 468 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 SLC16A14Q7RTX9 510 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 OR10S1Q8NGN2 331 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 OR2AJ1Q8NGZ0 328 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 NTNG2Q96CW9 530 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 C10orf35Q96D05 121 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 MRPL13Q9BYD1 178 aaKnown RBP9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 SPACA1Q9HBV2 294 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 KCNIP3Q9Y2W7 256 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 ATRXP46100 2492 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 CNTRLQ7Z7A1 2325 aa9.94□□□□□ -0.82
TSPAN1-201ENST00000372003 BTBD17A6NE02 478 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 A6NLC8 198 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 M0R036 132 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 AGPAT2O15120 278 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 PPIHO43447 177 aaKnown RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CRTAPO75718 401 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 HCKP08631 526 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 FREM3P0C091 2139 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 HOXA5P20719 270 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CHATP28329 748 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR3A4PP47883 348 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CAMLGP49069 296 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 SULT1A1P50225 295 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 SSTP61278 116 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 GRB2P62993 217 aaKnown RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CLINT1Q14677 625 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 SLC10A1Q14973 349 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 KRBOX4Q5JUW0 171 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR2A2Q6IF42 318 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 Q6ZSR3 168 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 YRDCQ86U90 279 aaKnown RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR2M3Q8NG83 312 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR51E1Q8TCB6 317 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 GALNT14Q96FL9 552 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 YPEL4Q96NS1 127 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 PECRQ9BY49 303 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR11A1Q9GZK7 315 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 TOLLIPQ9H0E2 274 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNF703Q9H7S9 590 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 BCO1Q9HAY6 547 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 DKKL1Q9UK85 242 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 IGSF10Q6WRI0 2623 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 A0A087WWC5 75 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 IGKV1D-43A0A0B4J1Z2 117 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 A0A1W2PPE3 182 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNHIT1O43257 154 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 IGLV3-1P01715 115 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CBR1P16152 277 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNF133P52736 654 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 POU3F1Q03052 451 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 WIPI1Q5MNZ9 446 aaPredicted RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 GGNBP1Q5YKI7 109 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 HEPN1Q6WQI6 88 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 FAM219AQ8IW50 185 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 FADS6Q8N9I5 356 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR51T1Q8NGJ9 327 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR14K1Q8NGZ2 314 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 OR14L1PQ8NHC6 308 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 INTS12Q96CB8 462 aaKnown RBP9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 GPER1Q99527 375 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 SUCNR1Q9BXA5 334 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 TREM2Q9NZC2 230 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 VDAC3Q9Y277 283 aa9.93□□□□□ -0.82
TSPAN1-201ENST00000372003 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
TSPAN1-201ENST00000372003 H7C1Q1 480 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms