RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 BEND2Q8NDZ0 799 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 PSMF1Q92530 271 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 R3HDM4Q96D70 268 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.74
PTPN1-201ENST00000371621 TECRQ9NZ01 308 aaKnown RBP10.4□□□□□ -0.74
PTPN1-201ENST00000371621 PIGLQ9Y2B2 252 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 CD99P14209 185 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 DUSP3P51452 185 aaPredicted RBP10.4□□□□□ -0.74
PTPN1-201ENST00000371621 NPSR1Q6W5P4 371 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 MFSD9Q8NBP5 474 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 OR6X1Q8NH79 312 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 PTPMT1Q8WUK0 201 aaPredicted RBP10.4□□□□□ -0.74
PTPN1-201ENST00000371621 ADGRG7Q96K78 797 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 WIPI2Q9Y4P8 454 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 SCN8AQ9UQD0 1980 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 H3BMH7 237 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 DAP3P51398 398 aaKnown RBP10.4□□□□□ -0.75
PTPN1-201ENST00000371621 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.75
PTPN1-201ENST00000371621 LINC01555Q8NAE3 123 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 OR52M1Q8NGK5 317 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 OR13G1Q8NGZ3 307 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 MRPL30Q8TCC3 161 aaKnown RBP10.4□□□□□ -0.75
PTPN1-201ENST00000371621 ST6GALNAC6Q969X2 333 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 ARRDC3Q96B67 414 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 HDAC8Q9BY41 377 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 PSENENQ9NZ42 101 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 Q9Y3F1 56 aa10.4□□□□□ -0.75
PTPN1-201ENST00000371621 PHIPQ8WWQ0 1821 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 SRP19P09132 144 aaKnown RBP10.39□□□□□ -0.75
PTPN1-201ENST00000371621 SUCLG1P53597 346 aaKnown RBP10.39□□□□□ -0.75
PTPN1-201ENST00000371621 NSDHLQ15738 373 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 STUMQ69YW2 141 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 OR10A5Q9H207 317 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 MANBALQ9NQG1 85 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 UQCR10Q9UDW1 63 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 TRPM6Q9BX84 2022 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 MANSC4A6NHS7 340 aaPredicted RBP10.39□□□□□ -0.75
PTPN1-201ENST00000371621 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 SIRPB1O00241 398 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 TUSC2O75896 110 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 CDAP32320 146 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 CCR2P41597 374 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF260Q3ZCT1 412 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 TSPAN32Q96QS1 320 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 PARLQ9H300 379 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 GAL3ST2Q9H3Q3 398 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 NAA60Q9H7X0 242 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 METTL7AQ9H8H3 244 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.39□□□□□ -0.75
PTPN1-201ENST00000371621 M0QZ24 198 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 M0R1X1 148 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 PAGE4O60829 102 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 HSPB1P04792 205 aaKnown RBP10.39□□□□□ -0.75
PTPN1-201ENST00000371621 APODP05090 189 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 BCL2P10415 239 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 UQCRFS1P47985 274 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 IL13RA2Q14627 380 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 MVB12AQ96EY5 273 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 FOXQ1Q9C009 403 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
PTPN1-201ENST00000371621 TMED7-TICAM2A0A0A6YYA0 188 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 TP53I11O14683 189 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 NGFRP08138 427 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 GABREP78334 506 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 MLC1Q15049 377 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 C1orf140Q5VVS0 124 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 Q6ZVH6 145 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CD99L2Q8TCZ2 262 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 MIEN1Q9BRT3 115 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 TRAV36DV7A0A075B6V5 113 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 GNG7O60262 68 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CDC14BO60729 498 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 SRPXP78539 464 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CXorf66Q5JRM2 361 aaPredicted RBP10.38□□□□□ -0.75
PTPN1-201ENST00000371621 METRNLQ641Q3 311 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 ACY3Q96HD9 319 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 FAM173AQ9BQD7 235 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CT45A8P0DMV1 189 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CT45A9P0DMV2 189 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 ECI1P42126 302 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 CT45A2Q5DJT8 189 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
PTPN1-201ENST00000371621 P4HTMQ9NXG6 502 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 SSC5DA1L4H1 1573 aa10.38□□□□□ -0.75
PTPN1-201ENST00000371621 IGHV3-64DA0A0J9YX35 117 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 LRRC3CA6NJW4 275 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 GDF9O60383 454 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 UTS2O95399 124 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 CT62P0C5K7 136 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms