RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CCDC59Q9P031 241 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 EIF3KQ9UBQ5 218 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 FOXJ3Q9UPW0 622 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 RHBDD3Q9Y3P4 386 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 LRBAP50851 2863 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 DOPEY1Q5JWR5 2465 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 A0A075B6Q4 140 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 C5orf51A6NDU8 294 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CD300LBA8K4G0 201 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 H0YIZ8 118 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 C19orf84I3L1E1 186 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SLC33A1O00400 549 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 RRHO14718 337 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 GMDSO60547 372 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CLDN14O95500 239 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 S100A6P06703 90 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CD2P06729 351 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 PRF1P14222 555 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 LOXP28300 417 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 CAMLGP49069 296 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ZNF81P51508 661 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 BSPH1Q075Z2 132 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 PSG7Q13046 419 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 PLA2G7Q13093 441 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 DGUOKQ16854 277 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ZNF404Q494X3 552 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 HES5Q5TA89 166 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR2T2Q6IF00 324 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 FAM166AQ6J272 317 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SFXN4Q6P4A7 337 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 XKRXQ6PP77 449 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 TMEM182Q6ZP80 229 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 PGAP1Q75T13 922 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 UTS2BQ765I0 119 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 MRPL21Q7Z2W9 205 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 LRP11Q86VZ4 500 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CCDC54Q8NEL0 328 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR56B2PQ8NGI1 322 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR5L1Q8NGL2 311 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR5D14Q8NGL3 314 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR6Q1Q8NGQ2 317 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR1J1Q8NGS3 322 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR5H6Q8NGV6 325 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 MCFD2Q8NI22 146 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SSC4DQ8WTU2 575 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SLC25A28Q96A46 364 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 HAVCR1Q96D42 359 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SPACA5Q96QH8 159 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 MIXL1Q9H2W2 232 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 KCNK15Q9H427 330 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ZNF391Q9UJN7 358 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 FZR1Q9UM11 496 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 V9GY05 133 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 TENM4Q6N022 2769 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 DCHS2Q6V1P9 2916 aa3□□□□□ -1.93
MCF2-202ENST00000370573 COL12A1Q99715 3063 aa3□□□□□ -1.93
MCF2-202ENST00000370573 IGKV1-27A0A075B6S5 117 aa3□□□□□ -1.93
MCF2-202ENST00000370573 GGT3PA6NGU5 568 aa3□□□□□ -1.93
MCF2-202ENST00000370573 IFITM5A6NNB3 132 aa3□□□□□ -1.93
MCF2-202ENST00000370573 DHRS7CA6NNS2 312 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ZNF850A8MQ14 1090 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TRIM77I1YAP6 450 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PDCD5O14737 125 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SULT1B1O43704 296 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CLPXO76031 633 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PAHP00439 452 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PLAUP00749 431 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CST4P01036 141 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CRYAAP02489 173 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ALDOBP05062 364 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CTRB1P17538 263 aa3□□□□□ -1.93
MCF2-202ENST00000370573 RAB3AP20336 220 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CFL1P23528 166 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 BDKRB2P30411 391 aa3□□□□□ -1.93
MCF2-202ENST00000370573 FABP6P51161 128 aa3□□□□□ -1.93
MCF2-202ENST00000370573 BCAP31P51572 246 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CLDN12P56749 244 aa3□□□□□ -1.93
MCF2-202ENST00000370573 B2MP61769 119 aa3□□□□□ -1.93
MCF2-202ENST00000370573 P2RY14Q15391 338 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ANXA2RQ3ZCQ2 193 aa3□□□□□ -1.93
MCF2-202ENST00000370573 C1orf100Q5SVJ3 147 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CLVS2Q5SYC1 327 aa3□□□□□ -1.93
MCF2-202ENST00000370573 NCMAPQ5T1S8 102 aa3□□□□□ -1.93
MCF2-202ENST00000370573 IDNKQ5T6J7 187 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
MCF2-202ENST00000370573 Q6YL49 198 aa3□□□□□ -1.93
MCF2-202ENST00000370573 Q6ZR03 302 aa3□□□□□ -1.93
MCF2-202ENST00000370573 BIVMQ86UB2 503 aa3□□□□□ -1.93
MCF2-202ENST00000370573 OR4D6Q8NGJ1 314 aa3□□□□□ -1.93
MCF2-202ENST00000370573 KLF14Q8TD94 323 aaPredicted RBP3□□□□□ -1.93
MCF2-202ENST00000370573 NPRL2Q8WTW4 380 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CHPT1Q8WUD6 406 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PIGCQ92535 297 aa3□□□□□ -1.93
MCF2-202ENST00000370573 GTF3AQ92664 365 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 THRSPQ92748 146 aa3□□□□□ -1.93
MCF2-202ENST00000370573 NEUROG1Q92886 237 aa3□□□□□ -1.93
MCF2-202ENST00000370573 RRNAD1Q96FB5 475 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 CHST5Q9GZS9 411 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SLITRK2Q9H156 845 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TMEM138Q9NPI0 162 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms