RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SCO1O75880 301 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 HAND1O96004 215 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 TSPAN7P41732 249 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 ERVFC1-1P60608 527 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 SIGLECL1Q8N7X8 197 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 SLC31A2O15432 143 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 SLC6A1P30531 599 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 ACSM6Q6P461 480 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 ASB5Q8WWX0 329 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 AAMDCQ9H7C9 122 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 NIT2Q9NQR4 276 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 COLQQ9Y215 455 aaPredicted RBP17.3■□□□□ 0.36
LMO4-202ENST00000370544 SURF2Q15527 256 aaPredicted RBP17.3■□□□□ 0.36
LMO4-202ENST00000370544 DNPH1O43598 174 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TBC1D26Q86UD7 250 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 RAB1CQ92928 201 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TMEM147Q9BVK8 224 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 NTMQ9P121 344 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 PILRAQ9UKJ1 303 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TRPM6Q9BX84 2022 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
LMO4-202ENST00000370544 OOEPA6NGQ2 149 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 CDIPTO14735 213 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 FOXO1Q12778 655 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 SLC26A10Q8NG04 563 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 SP1P08047 785 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 FOXL2P58012 376 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 FAM3AP98173 230 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 FAM162BQ5T6X4 162 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 ZDHHC11Q9H8X9 412 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TINAGQ9UJW2 476 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
LMO4-202ENST00000370544 PTP4A3O75365 173 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 ETV3LQ6ZN32 361 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 TTTY12Q9BZ98 90 aa17.29■□□□□ 0.36
LMO4-202ENST00000370544 C1QCP02747 245 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 MIXL1Q9H2W2 232 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 A0A1W2PN81 502 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 CHRNA7P36544 502 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 ZNRF4Q8WWF5 429 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 TMPRSS2O15393 492 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 ZP3P21754 424 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 CEACAM3P40198 252 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 PLPPR5Q32ZL2 321 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 MOGAT3Q86VF5 341 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 ZNF586Q9NXT0 402 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 INHBBP09529 407 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 TGIF2Q9GZN2 237 aa17.28■□□□□ 0.36
LMO4-202ENST00000370544 TRAV8-7A0A075B6U6 113 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 OR4F17Q8NGA8 305 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 ZPLD1Q8TCW7 415 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 GMPPAQ96IJ6 420 aaPredicted RBP17.27■□□□□ 0.36
LMO4-202ENST00000370544 MAP1LC3B2A6NCE7 125 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 LRRC3CA6NJW4 275 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 RPS4XP62701 263 aaKnown RBP17.27■□□□□ 0.36
LMO4-202ENST00000370544 ZNF561Q8N587 486 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 OR4S2Q8NH73 311 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 ADTRPQ96IZ2 230 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 MAP1LC3BQ9GZQ8 125 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 SOX15O60248 233 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 CLEC18BQ6UXF7 455 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 FBXL17Q9UF56 701 aa17.27■□□□□ 0.36
LMO4-202ENST00000370544 CDX4O14627 284 aaPredicted RBP17.27■□□□□ 0.35
LMO4-202ENST00000370544 ADAP1O75689 374 aa17.27■□□□□ 0.35
LMO4-202ENST00000370544 FCARP24071 287 aa17.27■□□□□ 0.35
LMO4-202ENST00000370544 MRPS11P82912 194 aaKnown RBP17.27■□□□□ 0.35
LMO4-202ENST00000370544 TIPARPQ7Z3E1 657 aaKnown RBP17.27■□□□□ 0.35
LMO4-202ENST00000370544 SEBOXQ9HB31 216 aaPredicted RBP17.27■□□□□ 0.35
LMO4-202ENST00000370544 ZMIZ1Q9ULJ6 1067 aa17.27■□□□□ 0.35
LMO4-202ENST00000370544 SLC45A2Q9UMX9 530 aa17.27■□□□□ 0.35
LMO4-202ENST00000370544 LANCL1O43813 399 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 TOX4O94842 621 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 NGFRP08138 427 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 PMELP40967 661 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 LIAT1Q6ZQX7 453 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 BMI1P35226 326 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 FBXW9Q5XUX1 488 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 FAM122AQ96E09 287 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 ZNF385AQ96PM9 386 aaKnown RBP17.26■□□□□ 0.35
LMO4-202ENST00000370544 TREM2Q9NZC2 230 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 CPN1P15169 458 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 TSPO2Q5TGU0 170 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 TRIP12Q14669 1992 aaPredicted RBP17.26■□□□□ 0.35
LMO4-202ENST00000370544 J3QT63 122 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 OPN1MWP04001 364 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 OPN1MW2P0DN77 364 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 OPN1MW3P0DN78 364 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 GGTLC2Q14390 218 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 BCL2L2Q92843 193 aaPredicted RBP17.26■□□□□ 0.35
LMO4-202ENST00000370544 CYB5R1Q9UHQ9 305 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 CACNA1CQ13936 2221 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 S100A8P05109 93 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 INO80CQ6PI98 192 aaPredicted RBP17.26■□□□□ 0.35
LMO4-202ENST00000370544 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 MRPS18AQ9NVS2 196 aaKnown RBP17.26■□□□□ 0.35
LMO4-202ENST00000370544 PRR13Q9NZ81 148 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 WSB1Q9Y6I7 421 aa17.26■□□□□ 0.35
LMO4-202ENST00000370544 EPOPA6NHQ4 379 aa17.25■□□□□ 0.35
LMO4-202ENST00000370544 HMSDA8MTL9 139 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms