RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CBR1P16152 277 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 RAB6AP20340 208 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 SERPINF1P36955 418 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 SLC6A9P48067 706 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 NANOS3P60323 173 aaKnown RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 ECH1Q13011 328 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 PDZK1IP1Q13113 114 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 DHRS2Q13268 280 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 MS4A18Q3C1V0 323 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 KRTAP24-1Q3LI83 254 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 H1FNTQ75WM6 255 aaPredicted RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 ZNF627Q7L945 461 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 TMEM123Q8N131 208 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 KDM8Q8N371 416 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 RFLNBQ8N5W9 214 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 COMMD1Q8N668 190 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 OR6K6Q8NGW6 343 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 FOXRED1Q96CU9 486 aaPredicted RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 NUDT16L1Q9BRJ7 211 aaKnown RBP12.76□□□□□ -0.37
LMO4-201ENST00000370542 WDR76Q9H967 626 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
LMO4-201ENST00000370542 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 UBE2CO00762 179 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 DOK2O60496 412 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ABHD16AO95870 558 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 RENP00797 406 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 CD2P06729 351 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 PET100P0DJ07 73 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 FSTP19883 344 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 USF1P22415 310 aaPredicted RBP12.75□□□□□ -0.37
LMO4-201ENST00000370542 ZBTB25P24278 435 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 POU3F4P49335 361 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 GSK3AP49840 483 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 CLDN17P56750 224 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 UBE2NP61088 152 aaKnown RBP12.75□□□□□ -0.37
LMO4-201ENST00000370542 HGFACQ04756 655 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
LMO4-201ENST00000370542 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 FAM166AQ6J272 317 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 SLC25A36Q96CQ1 311 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 FBXO17Q96EF6 278 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
LMO4-201ENST00000370542 SCGB3A2Q96PL1 93 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 GPR35Q9HC97 309 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 UQCC1Q9NVA1 299 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 FRRS1LQ9P0K9 344 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 ASH2LQ9UBL3 628 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 DNAJB11Q9UBS4 358 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 LAMP5Q9UJQ1 280 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 CDC42EP3Q9UKI2 254 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 KPTNQ9Y664 436 aa12.75□□□□□ -0.37
LMO4-201ENST00000370542 TGP01266 2768 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 ZNF503-AS2A6NEH8 195 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 SGCEO43556 437 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 LY6HO94772 140 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 BGLAPP02818 100 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 CRYBA1P05813 215 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 CD14P08571 375 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 SPP1P10451 314 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 PSMB6P28072 239 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 GRPRP30550 384 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 PPOXP50336 477 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 ARF1P84077 181 aaKnown RBP12.74□□□□□ -0.37
LMO4-201ENST00000370542 C2orf76Q3KRA6 126 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 BPIFB2Q8N4F0 458 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 TCTEX1D2Q8WW35 142 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 SEH1LQ96EE3 360 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 SEC61A2Q9H9S3 476 aa12.74□□□□□ -0.37
LMO4-201ENST00000370542 METTL1Q9UBP6 276 aaKnown RBP12.74□□□□□ -0.37
LMO4-201ENST00000370542 MRM2Q9UI43 246 aaKnown RBP12.74□□□□□ -0.37
LMO4-201ENST00000370542 A0A096LPE4 126 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 A0A1W2PPZ6 126 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 MFNGO00587 321 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 MT-ND4LP03901 98 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 OR4A8P0C604 315 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 OR8G3PP0DMU2 310 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 LYL1P12980 280 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 ARR3P36575 388 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 PDLIM4P50479 330 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 CAV2P51636 162 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 SSTP61278 116 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms