RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 DUSP1P28562 367 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DVL1P1P54792 670 aaPredicted RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 LSM3P62310 102 aaKnown RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 PIGYQ3MUY2 71 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 IFT22Q9H7X7 185 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 FBLN5Q9UBX5 448 aa12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 TEP1Q99973 2627 aaKnown RBP12.9□□□□□ -0.34
PRPF38B-202ENST00000370022 A0A0G2JK05 382 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 A0A1W2PP11 408 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 ZNF737O75373 536 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 OR2H2O95918 312 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 TFF1P04155 84 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 TK1P04183 234 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 LCN2P80188 198 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 QRFPP83859 136 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 MXD1Q05195 221 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 CTF1Q16619 201 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 HES5Q5TA89 166 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 Q6P435 159 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 SFXN4Q6P4A7 337 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 NR2C2APQ86WQ0 139 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM104Q8NE00 496 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 ST8SIA4Q92187 359 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM186Q96B77 213 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 DMRTB1Q96MA1 342 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 MRI1Q9BV20 369 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 LPAR2Q9HBW0 351 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 METRNQ9UJH8 293 aa12.9□□□□□ -0.35
PRPF38B-202ENST00000370022 LOC105371242A0A075B767 164 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 SELLP14151 372 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 TMBIM6P55061 237 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 VBP1P61758 197 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 NCS1P62166 190 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 P2RY14Q15391 338 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 FAM189A2Q15884 450 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 C17orf107Q6ZR85 190 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 OR8H2Q8N162 312 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 RAB2BQ8WUD1 216 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 BANF2Q9H503 90 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 LIN7BQ9HAP6 207 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 CELSR1Q9NYQ6 3014 aa12.89□□□□□ -0.35
PRPF38B-202ENST00000370022 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 A0A0X1KG70 313 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 SIRPB1O00241 398 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 SLC33A1O00400 549 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 GEMIN2O14893 280 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 FCN3O75636 299 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 CSN2P05814 226 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 LIPFP07098 398 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 NDUFB7P17568 137 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 GABRR1P24046 479 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 CLDN12P56749 244 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 SCAND1P57086 179 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 SCN1BQ07699 218 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 CLEC9AQ6UXN8 241 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 BTN2A1Q7KYR7 527 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 CLVS1Q8IUQ0 354 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 OR4M2Q8NGB6 313 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 FAM46BQ96A09 425 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 Q96M66 194 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 NAA50Q9GZZ1 169 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 KCNS2Q9ULS6 477 aa12.88□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 MGST3O14880 152 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 ENSAO43768 121 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 PSPNO60542 156 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 NOL3O60936 208 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 MPIG6BO95866 241 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 LY6G6DO95868 133 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 CLEC2LP0C7M8 214 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms