RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PIGYQ3MUY2 71 aa16.07■□□□□ 0.16
SNX27-202ENST00000368841 C12orf73Q69YU5 71 aa16.07■□□□□ 0.16
SNX27-202ENST00000368841 ZNF561Q8N587 486 aa16.07■□□□□ 0.16
SNX27-202ENST00000368841 OR2A5Q96R48 311 aa16.07■□□□□ 0.16
SNX27-202ENST00000368841 SOSTQ9BQB4 213 aa16.07■□□□□ 0.16
SNX27-202ENST00000368841 GLULP15104 373 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 OR4C46A6NHA9 309 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 CDIPTO14735 213 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 DGAT2L7PQ6IED9 249 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 TMUB1Q9BVT8 246 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 TOLLIPQ9H0E2 274 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 LHX9Q9NQ69 397 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 RASL12Q9NYN1 266 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 ARRDC5A6NEK1 342 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 ADAP1O75689 374 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 RNASE1P07998 156 aaKnown RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 UBE2L3P68036 154 aaKnown RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 CEBPEQ15744 281 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 PDPNQ86YL7 162 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 HAND1O96004 215 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 ACP1P24666 158 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 OR4P4Q8NGL7 312 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 GRAMD2BQ96HH9 432 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 NAA60Q9H7X0 242 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 MYO5AQ9Y4I1 1855 aaKnown RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 hADV38S2A0JD32 116 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 SNRPEP62304 92 aaKnown RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 Q8IYB0 196 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 R3HDM4Q96D70 268 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 MRPL37Q9BZE1 423 aaKnown RBP16.06■□□□□ 0.16
SNX27-202ENST00000368841 WDR13Q9H1Z4 485 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 DHRS2Q13268 280 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 TMEM241Q24JQ0 296 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
SNX27-202ENST00000368841 M0R296 226 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 VSTM2LQ96N03 204 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 MMP26Q9NRE1 261 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 HSPB2A8KAH6 182 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 CDRT15L2A8MXV6 281 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 HPXP02790 462 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 CRYBB2P43320 205 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 KCNJ3P48549 501 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 HSPB2Q16082 182 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 PIK3IP1Q96FE7 263 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 ZFP64Q9NPA5 681 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 GPR27Q9NS67 375 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 A0A1W2PN81 502 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 OR1L6Q8NGR2 347 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 SPSB1Q96BD6 273 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 LPAR5Q9H1C0 372 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 SOCS1O15524 211 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 PSG5Q15238 335 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 OR4D9Q8NGE8 314 aa16.05■□□□□ 0.16
SNX27-202ENST00000368841 TUBAL3A6NHL2 446 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 ZNF207O43670 478 aaKnown RBP16.04■□□□□ 0.16
SNX27-202ENST00000368841 RAB7AP51149 207 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 UCN2Q96RP3 112 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 SAP30LQ9HAJ7 183 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 MRGPRX3Q96LB0 322 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 CDC42EP2O14613 210 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 OR8A1Q8NGG7 326 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 ANGPTL6Q8NI99 470 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 TRBV23-1A0A0A0MS06 115 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 DAOP14920 347 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 MOB1BQ7L9L4 216 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 GNG7O60262 68 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 PPOXP50336 477 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 WNT3P56703 355 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 KLHDC1Q8N7A1 406 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 DUSP21Q9H596 190 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 HAX1O00165 279 aa16.04■□□□□ 0.16
SNX27-202ENST00000368841 RPL34P49207 117 aaKnown RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 PLAURQ03405 335 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 SLC23A3Q6PIS1 610 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 OR5R1Q8NH85 324 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 IGKV3D-11A0A0A0MRZ8 115 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 IGKV3-11P04433 115 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 FAM162BQ5T6X4 162 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 ADAD2Q8NCV1 583 aaKnown RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 ZNF488Q96MN9 340 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 VSIG4Q9Y279 399 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 AESQ08117 197 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 CTF1Q16619 201 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 MRPL54Q6P161 138 aaKnown RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 CADM4Q8NFZ8 388 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 SLC45A2Q9UMX9 530 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 FAM87AP0C7U9 286 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 KIR2DS2P43631 304 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 RPL30P62888 115 aaKnown RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 MRPS11P82912 194 aaKnown RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 SLC7A10Q9NS82 523 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 FBXL17Q9UF56 701 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 WSB1Q9Y6I7 421 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 PMELP40967 661 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 NCMAPQ5T1S8 102 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 OR8D4Q8NGM9 314 aa16.03■□□□□ 0.16
SNX27-202ENST00000368841 ZNF275Q9NSD4 429 aaPredicted RBP16.03■□□□□ 0.16
SNX27-202ENST00000368841 EPHA8P29322 1005 aaPredicted RBP16.02■□□□□ 0.16
SNX27-202ENST00000368841 MPV17LQ2QL34 196 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms