RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 POC1AQ8NBT0 407 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 Q8NFD4 153 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 LRRC29Q8WV35 223 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 DACT3Q96B18 629 aaPredicted RBP13.44□□□□□ -0.26
LMNA-203ENST00000368297 MED28Q9H204 178 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 RHOFQ9HBH0 211 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMNA-203ENST00000368297 ING3Q9NXR8 418 aa13.44□□□□□ -0.26
LMNA-203ENST00000368297 DOPEY1Q5JWR5 2465 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 DISC1C4P0D8 188 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 GEMIN2O14893 280 aaKnown RBP13.43□□□□□ -0.26
LMNA-203ENST00000368297 CLDN1O95832 211 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 CD74P04233 296 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 TBPP20226 339 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 FAM209AQ5JX71 171 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 BOLLQ8N9W6 283 aaKnown RBP13.43□□□□□ -0.26
LMNA-203ENST00000368297 OR11L1Q8NGX0 322 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 VRK1Q99986 396 aaPredicted RBP13.43□□□□□ -0.26
LMNA-203ENST00000368297 NRIP2Q9BQI9 281 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 OR51J1Q9H342 316 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 CBLN4Q9NTU7 201 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 SCP2D1Q9UJQ7 156 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 PLEKHA6Q9Y2H5 1048 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 FLNCQ14315 2725 aa13.43□□□□□ -0.26
LMNA-203ENST00000368297 ICE1Q9Y2F5 2266 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ADGRG4Q8IZF6 3080 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 A0A1W2PPR1 153 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 SERPINE3A8MV23 424 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ARPC1BO15143 372 aaKnown RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 NOS1APO75052 506 aaPredicted RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 COX6B1P14854 86 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GLRA1P23415 457 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GATA4P43694 442 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ARFRP1Q13795 201 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 PLAC9Q5JTB6 97 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 NKAPLQ5M9Q1 402 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 METTL11BQ5VVY1 283 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 FAAP20Q6NZ36 180 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 FIP1L1Q6UN15 594 aaKnown RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 OR10Z1Q8NGY1 313 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 NUDCD2Q8WVJ2 157 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GIMAP1Q8WWP7 306 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ARHGAP5-AS1Q96IT6 56 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ST6GAL2Q96JF0 529 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GINS4Q9BRT9 223 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 GPN1Q9HCN4 374 aaPredicted RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 IL36RNQ9UBH0 155 aa13.42□□□□□ -0.26
LMNA-203ENST00000368297 ELF5Q9UKW6 265 aaPredicted RBP13.42□□□□□ -0.26
LMNA-203ENST00000368297 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 CLEC18AA5D8T8 446 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 MFNGO00587 321 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 WNT9BO14905 357 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 CA11O75493 328 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 OR7C1O76099 320 aaPredicted RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 IRF2P14316 349 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 DUSP1P28562 367 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 TMEM50BP56557 158 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 ERVK11-1P61568 191 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 IKZF1Q13422 519 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 PDCD1Q15116 288 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 RNASE10Q5GAN6 216 aaKnown RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 ATAD3CQ5T2N8 411 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 CD276Q5ZPR3 534 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 CLEC18BQ6UXF7 455 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 CLEC18CQ8NCF0 446 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 ERGIC1Q969X5 290 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 MED30Q96HR3 178 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 SLC25A21Q9BQT8 299 aaPredicted RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 GCM1Q9NP62 436 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 TREM2Q9NZC2 230 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
LMNA-203ENST00000368297 USP9XQ93008 2570 aaPredicted RBP13.41□□□□□ -0.26
LMNA-203ENST00000368297 AMY2AP04746 511 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 FCER2P06734 321 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 PMELP40967 661 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 PPOXP50336 477 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 CBX3Q13185 183 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 ZMYND11Q15326 602 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 ACTBL2Q562R1 376 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 NHLRC3Q5JS37 347 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 RTN4RL2Q86UN3 420 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 BPIFB2Q8N4F0 458 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 PRRT1Q99946 306 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 OCSTAMPQ9BR26 566 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 PECRQ9BY49 303 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 PLEKHJ1Q9NW61 149 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 RNF7Q9UBF6 113 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 KCNK7Q9Y2U2 307 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 FAM90A10PA6NDY2 464 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 FAM90A18PA6NE21 464 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 FAM90A16PA6NEW6 464 aa13.4□□□□□ -0.26
LMNA-203ENST00000368297 FAM90A20PA6NIJ5 464 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms