RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PTGFRP43088 359 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ERVS71-1P61550 626 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 QRFPP83859 136 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 GK2Q14410 553 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 RNPS1Q15287 305 aaKnown RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 NKPD1Q17RQ9 610 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 PRR30Q53SZ7 412 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 UQCC3Q6UW78 93 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SPNS3Q6ZMD2 512 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MDP1Q86V88 176 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SEMA6DQ8NFY4 1073 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 TNFAIP8L1Q8WVP5 186 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 CREB3L1Q96BA8 519 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MEGF10Q96KG7 1140 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 C1orf147Q96MC9 270 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 METTL17Q9H7H0 456 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ZFP57Q9NU63 452 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 WASF3Q9UPY6 502 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 STARD10Q9Y365 291 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 V9GYS6 101 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 KIAA2026Q5HYC2 2103 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ACACBO00763 2458 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MEGF11A6BM72 1044 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF850A8MQ14 1090 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MKRN2OSH3BPM6 223 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 M0R233 179 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 RAB27BO00194 218 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ARPC1BO15143 372 aaKnown RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 GSTZ1O43708 216 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 FAM87AP0C7U9 286 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 METTL15P1P0C7V9 234 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 IGHV1-2P23083 117 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 STOMP27105 288 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 S100A11P31949 105 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 PRSS3P35030 304 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 THBS4P35443 961 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MNDAP41218 407 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 IDH3GP51553 393 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 PRRX1P54821 245 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MTCP1P56278 107 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 UBE2MP61081 183 aaKnown RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 BTG1P62324 171 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 FAM3AP98173 230 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 HOXA4Q00056 320 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 HAGHQ16775 308 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 LINC00303Q3SY05 128 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 FBXW9Q5XUX1 488 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 DRAM2Q6UX65 266 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 Q6ZTK2 550 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 CD163Q86VB7 1156 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 UXS1Q8NBZ7 420 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 OR52B4Q8NGK2 314 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 OR4C16Q8NGL9 310 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 OR1K1Q8NGR3 316 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 OR4K15Q8NH41 348 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 DYRK2Q92630 601 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 THRSPQ92748 146 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SEH1LQ96EE3 360 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 NOL4LQ96MY1 436 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 MARVELD1Q9BSK0 173 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 GGACTQ9BVM4 153 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SIRT7Q9NRC8 400 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 CLCF1Q9UBD9 225 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF230Q9UIE0 474 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 FZR1Q9UM11 496 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 RPH3ALQ9UNE2 315 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 SHANK1Q9Y566 2161 aa4.39□□□□□ -1.71
ATXN3-202ENST00000359366 YLPM1P49750 1951 aaKnown RBP4.39□□□□□ -1.71
ATXN3-202ENST00000359366 A0A087X0M5 115 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 A0A1B0GX30 115 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ANKRD20A5PA0PJZ0 165 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CDC14BO60729 498 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GGCTO75223 188 aaKnown RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF205O95201 554 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 IGHG3P01860 377 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 HPXP02790 462 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM225BP0DP42 221 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ANXA3P12429 323 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GABRA1P14867 456 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 SELEP16581 610 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GABRR1P24046 479 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 KIR2DL2P43627 348 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 KCNJ3P48549 501 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GMFBP60983 142 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PCBD1P61457 104 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 SORDQ00796 357 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 MPPED2Q15777 294 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PLCXD3Q63HM9 321 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CYB5R2Q6BCY4 276 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 BAIAP2L2Q6UXY1 529 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 SEM1Q6ZVN7 128 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 MOB3CQ70IA8 216 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 TRAPPC6BQ86SZ2 158 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FAM185AQ8N0U4 392 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms