RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 OR2W5A6NFC9 320 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 EML2O95834 649 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ARG1P05089 322 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SLC37A1P57057 533 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ACER2Q5QJU3 275 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OTUD1Q5VV17 481 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CLEC2AQ6UVW9 174 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SYS1Q8N2H4 156 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 APOBEC4Q8WW27 367 aaKnown RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SGK494Q96LW2 274 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CDX2Q99626 313 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CACNG5Q9UF02 275 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SS18L1O75177 396 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 FAM53BQ14153 422 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MIDNQ504T8 468 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 PAQR6Q6TCH4 344 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ORAI1Q96D31 301 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 C4orf45Q96LM5 186 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SMOC1Q9H4F8 434 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 POMT2Q9UKY4 750 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MYH9P35579 1960 aaKnown RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 TCL1AP56279 114 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 CLDN18P56856 261 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 GUCA2AQ02747 115 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 HERPUD1Q15011 391 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 MOGAT3Q86VF5 341 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM229BQ8NBD8 167 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 OR10D3Q8NH80 312 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 MED30Q96HR3 178 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 MS4A10Q96PG2 267 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 RAB40CQ96S21 281 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 INSIG2Q9Y5U4 225 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 M0R296 226 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FCMRO60667 390 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 PF4P02776 101 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 WNT5AP41221 380 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 CACNG7P62955 275 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 CDK5R1Q15078 307 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 D2HGDHQ8N465 521 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF502Q8TBZ5 544 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 SNRNP40Q96DI7 357 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 ADTRPQ96IZ2 230 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 GHITMQ9H3K2 345 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 RALYQ9UKM9 306 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TMSB15BA0A087X1C1 80 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 CTSLP07711 333 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 RPS4Y1P22090 263 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 COL8A1P27658 744 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 PMS2P11Q13670 270 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 IL11RAQ14626 422 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM174Q8WUU8 243 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 OR2A5Q96R48 311 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 DOK1Q99704 481 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 GSX2Q9BZM3 304 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 JUNBP17275 347 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 GPX2P18283 190 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FPR2P25090 351 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 C1orf53Q5VUE5 145 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 LINC01465Q8N7H1 131 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF441Q8N8Z8 693 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FAM222BQ8WU58 562 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 DDB2Q92466 427 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 METTL26Q96S19 204 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 C1QBP02746 253 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 WNT1P04628 370 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 GABRB1P18505 474 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 DCTDP32321 178 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 CCR2P41597 374 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FZD5Q13467 585 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 FOXB2Q5VYV0 432 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 OR2G2Q8NGZ5 317 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
CLIP1-202ENST00000358808 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
CLIP1-202ENST00000358808 COL4A5P29400 1685 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 OR5B21A6NL26 309 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 NPIPB6E9PJ23 425 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 LMO7DNF2Z398 122 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 M0R143 59 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 CORTO00230 105 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 UPK1AO00322 258 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 SLC6A1P30531 599 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ISL1P61371 349 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 SLC25A40Q8TBP6 338 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ABHD3Q8WU67 409 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms