RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 WFDC11Q8NEX6 87 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 MRI1Q9BV20 369 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 C6orf62Q9GZU0 229 aaPredicted RBP21.15■□□□□ 0.98
SSBP3-202ENST00000357475 ATG5Q9H1Y0 275 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 ITGB1BP2Q9UKP3 347 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 TRAV24A0A0B4J272 114 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 TMEM82A0PJX8 343 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 TMPRSS2O15393 492 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 ADAM20O43506 726 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 PSPNO60542 156 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 ZNF44P15621 663 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 SEC61A1P61619 476 aaKnown RBP21.14■□□□□ 0.98
SSBP3-202ENST00000357475 FAM89BQ8N5H3 189 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 CLDND2Q8NHS1 167 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 PTX4Q96A99 478 aa21.14■□□□□ 0.98
SSBP3-202ENST00000357475 FOXI3A8MTJ6 420 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-202ENST00000357475 SLC33A1O00400 549 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-202ENST00000357475 SH2D1BO14796 132 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 DEGS1O15121 323 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 ELK1P19419 428 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 IL2RGP31785 369 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 ATPAF1Q5TC12 328 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-202ENST00000357475 PRSS57Q6UWY2 283 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 LAX1Q8IWV1 398 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 MUC20Q8N307 709 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-202ENST00000357475 SDSLQ96GA7 329 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 URM1Q9BTM9 101 aaKnown RBP21.14■□□□□ 0.97
SSBP3-202ENST00000357475 CHST6Q9GZX3 395 aa21.14■□□□□ 0.97
SSBP3-202ENST00000357475 ZNF469Q96JG9 3925 aaPredicted RBP21.13■□□□□ 0.97
SSBP3-202ENST00000357475 A0A075B6Q4 140 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 CPT2P23786 658 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 TMEM50BP56557 158 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 DYNC1I2Q13409 638 aaKnown RBP21.13■□□□□ 0.97
SSBP3-202ENST00000357475 MADCAM1Q13477 382 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 MPV17LQ2QL34 196 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 UBE2NLQ5JXB2 153 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 ATAD3CQ5T2N8 411 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 C17orf107Q6ZR85 190 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 ZNF665Q9H7R5 613 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 ABCA2Q9BZC7 2435 aa21.13■□□□□ 0.97
SSBP3-202ENST00000357475 CR1P17927 2039 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 A0A096LNT2 108 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 RAB27BO00194 218 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 ZNF737O75373 536 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 MZT2AQ6P582 158 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 BPIFB2Q8N4F0 458 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 ITPR3Q14573 2671 aa21.12■□□□□ 0.97
SSBP3-202ENST00000357475 MYO9AB2RTY4 2548 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 NKX6-3A6NJ46 265 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 SIGLEC5O15389 551 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 RGS5O15539 181 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 CHRM2P08172 466 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 WNT2P09544 360 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 RPS2P15880 293 aaKnown RBP21.11■□□□□ 0.97
SSBP3-202ENST00000357475 LMO1P25800 156 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 BLVRBP30043 206 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-202ENST00000357475 RANBP1P43487 201 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 PITPNBP48739 271 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 LMO4P61968 165 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 KCNJ8Q15842 424 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 PLAC9Q5JTB6 97 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 NKAPLQ5M9Q1 402 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 SHEQ5VZ18 495 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 C6orf201Q7Z4U5 140 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 LINC00596Q86U02 117 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 IZUMO1Q8IYV9 350 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 SPICQ8N5J4 248 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 ASCC1Q8N9N2 400 aaKnown RBP21.11■□□□□ 0.97
SSBP3-202ENST00000357475 SUMF2Q8NBJ7 301 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 MAPK1IP1LQ8NDC0 245 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 OR4S1Q8NGB4 309 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 DYRK2Q92630 601 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 SHARPINQ9H0F6 387 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 ABCG5Q9H222 651 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 PPA2Q9H2U2 334 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 IFT22Q9H7X7 185 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 PATZ1Q9HBE1 687 aaKnown RBP21.11■□□□□ 0.97
SSBP3-202ENST00000357475 RCC2Q9P258 522 aaKnown RBP21.11■□□□□ 0.97
SSBP3-202ENST00000357475 GLS2Q9UI32 602 aa21.11■□□□□ 0.97
SSBP3-202ENST00000357475 RNF223E7ERA6 249 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 F5H0A9 414 aaPredicted RBP21.1■□□□□ 0.97
SSBP3-202ENST00000357475 IGHV2-5P01817 119 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 SLC25A16P16260 332 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 CHATP28329 748 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 OR3A1P47881 315 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 IL13RA1P78552 427 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 ZNF841Q6ZN19 808 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 ARHGAP5-AS1Q96IT6 56 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 DNTTIP1Q9H147 329 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 SEBOXQ9HB31 216 aaPredicted RBP21.1■□□□□ 0.97
SSBP3-202ENST00000357475 KAAG1Q9UBP8 84 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 PCDHB10Q9UN67 800 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 PEX16Q9Y5Y5 336 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 ARHGAP32A7KAX9 2087 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 DOCK11Q5JSL3 2073 aa21.1■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A10PA6NDY2 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A18PA6NE21 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A16PA6NEW6 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A20PA6NIJ5 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A8PA6NJQ4 464 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms