RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
HOXA1-202ENST00000355633 COPZ2Q9P299 210 aa11.51□□□□□ -0.57
HOXA1-202ENST00000355633 WNT9BO14905 357 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 CD74P04233 296 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF44P15621 663 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 GATA4P43694 442 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF146Q15072 292 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 EFNB3Q15768 340 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SPIN3Q5JUX0 258 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF782Q6ZMW2 699 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 HOGA1Q86XE5 327 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 LILRB1Q8NHL6 650 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 DYRK2Q92630 601 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SNAPC3Q92966 411 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 WDR13Q9H1Z4 485 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF701Q9NV72 531 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ZNF230Q9UIE0 474 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SMG1Q96Q15 3661 aaKnown RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 B9A039 149 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 MCRIP1C9JLW8 97 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 M0QYG6 137 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SH2D1BO14796 132 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 DEGS1O15121 323 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 TCRBP04435 133 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 CFHR2P36980 270 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 RNASE10Q5GAN6 216 aaKnown RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 RSBN1Q5VWQ0 802 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 Q6P435 159 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 OR56B4Q8NH76 319 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 UPRTQ96BW1 309 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 DHRS9Q9BPW9 319 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 TINAGL1Q9GZM7 467 aaPredicted RBP11.5□□□□□ -0.57
HOXA1-202ENST00000355633 IFT22Q9H7X7 185 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 ICE1Q9Y2F5 2266 aa11.5□□□□□ -0.57
HOXA1-202ENST00000355633 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 HSPB6O14558 160 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 HS3ST1O14792 307 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 CD55P08174 381 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 AMY2BP19961 511 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 DTYMKP23919 212 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
HOXA1-202ENST00000355633 MEF2DQ14814 521 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 BEST4Q8NFU0 473 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 OR4K15Q8NH41 348 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 RDH5Q92781 318 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 ERGIC1Q969X5 290 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 MARVELD1Q9BSK0 173 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 OR14J1Q9UGF5 321 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 GLS2Q9UI32 602 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 PLEKHA6Q9Y2H5 1048 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 NUBP2Q9Y5Y2 271 aa11.49□□□□□ -0.57
HOXA1-202ENST00000355633 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 C19orf84I3L1E1 186 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 OR2H2O95918 312 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 KNG1P01042 644 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 AMY2AP04746 511 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 GLAP06280 429 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 FCGR3AP08637 254 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 TBPP20226 339 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 HRH1P35367 487 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 CCL8P80075 99 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 RBM39Q14498 530 aaKnown RBP11.48□□□□□ -0.57
HOXA1-202ENST00000355633 MST1LQ2TV78 715 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 ACTBL2Q562R1 376 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 FAM209AQ5JX71 171 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 ZCCHC24Q8N2G6 241 aaKnown RBP11.48□□□□□ -0.57
HOXA1-202ENST00000355633 OR51S1Q8NGJ8 323 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 FAM222BQ8WU58 562 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 MAFIPQ8WZ33 124 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 CREB3L1Q96BA8 519 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 DPCDQ9BVM2 203 aaPredicted RBP11.48□□□□□ -0.57
HOXA1-202ENST00000355633 CHST6Q9GZX3 395 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 MS4A5Q9H3V2 200 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 NUDT15Q9NV35 164 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 EDARQ9UNE0 448 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 FAM221AA4D161 298 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 INMT-MINDY4F8WBC2 141 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 SIRPB1O00241 398 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 HAND1O96004 215 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 EGR1P18146 543 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 S100A1P23297 94 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 TESK1Q15569 626 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 MUC15Q8N387 334 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 BPIFB2Q8N4F0 458 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 CHMP1AQ9HD42 196 aaPredicted RBP11.48□□□□□ -0.57
HOXA1-202ENST00000355633 DECR2Q9NUI1 292 aa11.48□□□□□ -0.57
HOXA1-202ENST00000355633 TRAV6A0A075B6T7 132 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms