RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DOCK9Q9BZ29 2069 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 HLA-GP17693 338 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SPEM2Q0P670 501 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 HLA-DRB5Q30154 266 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM27D1Q5T7N8 215 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 TMEM251Q8N6I4 163 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 ISL1P61371 349 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC25A35Q3KQZ1 300 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 MED19A0JLT2 244 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 CST4P01036 141 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 TCL1AP56279 114 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 NAAAQ02083 359 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 JMJD6Q6NYC1 403 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 FGF20Q9NP95 211 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 C9orf170A2RU37 121 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM181BA6NEQ2 426 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 CLDN34H7C241 214 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 EIF3IQ13347 325 aaKnown RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 ECSCRQ19T08 205 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 LINC00299Q6ZSB3 139 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF142P52746 1687 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC17A2O00624 439 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SMPD2O60906 423 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 C6orf201Q7Z4U5 140 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SPEM1Q8N4L4 309 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 NT5CQ8TCD5 201 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 LRRC61Q9BV99 259 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 WDR74Q6RFH5 385 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 OR2C3Q8N628 320 aa5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 SNRNP40Q96DI7 357 aaKnown RBP5.15□□□□□ -1.59
SRGAP1-201ENST00000355086 PHYHIPLQ96FC7 376 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 VN1R1Q9GZP7 353 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 COX6CP09669 75 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 CCL2P13500 99 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 HIST1H1BP16401 226 aaKnown RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF253O75346 499 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ASCL5Q7RTU5 278 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 RER1O15258 196 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ROM1Q03395 351 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 FAHD2AQ96GK7 314 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 PRDM14Q9GZV8 571 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 DUSP21Q9H596 190 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SS18L1O75177 396 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC25A1P53007 311 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 TECRQ9NZ01 308 aaKnown RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 IL17BQ9UHF5 180 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZBTB42B2RXF5 422 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC17A5Q9NRA2 495 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 KCNE3Q9Y6H6 103 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 CLDN18P56856 261 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 KHDC3LQ587J8 217 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 PTPMT1Q8WUK0 201 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 STARD4Q96DR4 205 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 MT-CO3P00414 261 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 GBGT1Q8N5D6 347 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 LSMEM1Q8N8F7 131 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 BTF3P20290 206 aaKnown RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 FOXO1Q12778 655 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 OR10D3Q8NH80 312 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 PIK3IP1Q96FE7 263 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 FBXL17Q9UF56 701 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 LIPGQ9Y5X9 500 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 CHD2O14647 1828 aaKnown RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 A6NJY4 79 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 C11orf94C9JXX5 98 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SMIM4Q8WVI0 70 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 TIMP4Q99727 224 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 AP4M1O00189 453 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 EPPINO95925 133 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 APELAP0DMC3 54 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 OR2W5A6NFC9 320 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SFT2D2O95562 160 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ARG1P05089 322 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM24BQ8N5W8 94 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 H7C2G1 150 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 AKR7A2O43488 359 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF324O75467 553 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 HMGA1P17096 107 aaKnown RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 GLDNQ6ZMI3 551 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 C16orf82Q7Z2V1 217 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 IFT22Q9H7X7 185 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 LPAR2Q9HBW0 351 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 BCL2L10Q9HD36 194 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SBK3P0C264 359 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 OR10G8Q8NGN5 311 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF502Q8TBZ5 544 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ORAI1Q96D31 301 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SIRT5Q9NXA8 310 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 OOEPA6NGQ2 149 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF205O95201 554 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 TWIST1Q15672 202 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 PABPC1L2AQ5JQF8 200 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 SGK494Q96LW2 274 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 APCSP02743 223 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 ZBTB37Q5TC79 503 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 PTX4Q96A99 478 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 AKIRIN1Q9H9L7 192 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 NAT8Q9UHE5 227 aa5.14□□□□□ -1.59
SRGAP1-201ENST00000355086 OR1L6Q8NGR2 347 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms