RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 FAM90A12PA8MX19 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A5PA8MXJ8 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A23PA8MXZ1 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 TP53I11O14683 189 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A15PP0C7V4 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A13PP0C7W8 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A14PP0C7W9 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A24PP0C7X0 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 ITGA3P26006 1051 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 CCL20P78556 96 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 DLX2Q07687 328 aaPredicted RBP9.9□□□□□ -0.83
CAPN9-202ENST00000354537 MALLQ13021 153 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 ICAM4Q14773 271 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 OR8G1Q15617 311 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 KRTAP27-1Q3LI81 207 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 PYY3Q5JQD4 70 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 PHYHD1Q5SRE7 291 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 WDR5BQ86VZ2 330 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 TMEM252Q8N6L7 170 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 NIPSNAP3BQ9BS92 247 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 PLEK2Q9NYT0 353 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 C19orf25Q9UFG5 118 aaPredicted RBP9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FOXD3Q9UJU5 478 aaPredicted RBP9.9□□□□□ -0.83
CAPN9-202ENST00000354537 DKKL1Q9UK85 242 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 ZNF724A8MTY0 619 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 OPN1LWP04000 364 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 CD63P08962 238 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 FUT6P51993 359 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 NDUFA6P56556 154 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 VAMP2P63027 116 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 TSPO2Q5TGU0 170 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 Q6ZS52 159 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 REEP6Q96HR9 211 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 PFDN5Q99471 154 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 PCDH15Q96QU1 1955 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 IGKV1-27A0A075B6S5 117 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 NKX2-6A6NCS4 301 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 NPIPA2E9PIF3 369 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 NPIPA3F8WFD2 350 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 OR2J2O76002 312 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 YIF1AO95070 293 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 PPYP01298 95 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 DBHP09172 617 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 CST2P09228 141 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
CAPN9-202ENST00000354537 TCN2P20062 427 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 AADACP22760 399 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 DLK1P80370 383 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 DEFA6Q01524 100 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 ID3Q02535 119 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 FOXO1Q12778 655 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
CAPN9-202ENST00000354537 IL24Q13007 206 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 SNAI3Q3KNW1 292 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 ACSF3Q4G176 576 aaPredicted RBP9.89□□□□□ -0.83
CAPN9-202ENST00000354537 DPPA2Q7Z7J5 298 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 C20orf196Q8IYI0 205 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 MAML2Q8IZL2 1156 aaPredicted RBP9.89□□□□□ -0.83
CAPN9-202ENST00000354537 Q8NFD4 153 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 Q8WTZ3 238 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 RLN3Q8WXF3 142 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 TP53RKQ96S44 253 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 WSB1Q9Y6I7 421 aa9.89□□□□□ -0.83
CAPN9-202ENST00000354537 RP1P56715 2156 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 ZNF587BE7ETH6 402 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 GPR37O15354 613 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 DNPH1O43598 174 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 ANGPTL7O43827 346 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 IFNA10P01566 189 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 FUT3P21217 361 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 CHAF1BQ13112 559 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 DMRTC1Q5HYR2 192 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 ZNF695Q8IW36 515 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 SELENOHQ8IZQ5 122 aaKnown RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 OR11L1Q8NGX0 322 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 CLDND2Q8NHS1 167 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 GFOD1Q9NXC2 390 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 SLC7A11Q9UPY5 501 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 PROB1E7EW31 1015 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 GEMIN2O14893 280 aaKnown RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 SPRY1O43609 319 aaPredicted RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 SYNGR3O43761 229 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 NRASP01111 189 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 RND2P52198 227 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 GPR137CQ8N3F9 429 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 ZFP62Q8NB50 900 aaPredicted RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 OR1F12Q8NHA8 337 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 M1APQ8TC57 530 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 RASL10BQ96S79 203 aa9.88□□□□□ -0.83
CAPN9-202ENST00000354537 RBM24Q9BX46 236 aaKnown RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 UBE2J1Q9Y385 318 aaPredicted RBP9.88□□□□□ -0.83
CAPN9-202ENST00000354537 HIST1H2BKO60814 126 aa9.87□□□□□ -0.83
CAPN9-202ENST00000354537 DFFBO76075 338 aa9.87□□□□□ -0.83
CAPN9-202ENST00000354537 HIST1H2BJP06899 126 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms