RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NUDT16L1Q9BRJ7 211 aaKnown RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 PCGF1Q9BSM1 259 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 SOHLH2Q9NX45 425 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 TDRD6O60522 2096 aaKnown RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 A0A1B0GU03 582 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF41P51814 821 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 MLF1P58340 268 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 HSF1Q00613 529 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 PNRC1Q12796 327 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 PDCD1Q15116 288 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 ARSJQ5FYB0 599 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM31Q5JXX7 168 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM252Q8N6L7 170 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 ARL6IP6Q8N6S5 226 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 ELSPBP1Q96BH3 223 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 GPHA2Q96T91 129 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 CALHM2Q9HA72 323 aa6.67□□□□□ -1.34
BRCA1-201ENST00000352993 IL18BPO95998 194 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ADH1BP00325 375 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 FAHP16930 419 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF43P17038 809 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 WNT5AP41221 380 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 GALR1P47211 349 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ELLP55199 621 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 C1orf61Q13536 156 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 CXorf66Q5JRM2 361 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 LHX8Q68G74 356 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 UEVLDQ8IX04 471 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 BATF2Q8N1L9 274 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 SDSLQ96GA7 329 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 TBX15Q96SF7 602 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 SEMA5BQ9P283 1151 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 THAP10Q9P2Z0 257 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 DOCK11Q5JSL3 2073 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 HMGB3O15347 200 aaKnown RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 GUCA1AP43080 201 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 FUT7Q11130 342 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 RSPO4Q2I0M5 234 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF776Q68DI1 518 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ETFRF1Q6IPR1 90 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 TOMM20LQ6UXN7 152 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 CCDC71LQ8N9Z2 235 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 THAP3Q8WTV1 239 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM171Q8WVE6 324 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 C1orf147Q96MC9 270 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 SRD5A3Q9H8P0 318 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 PARD6AQ9NPB6 346 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF319Q9P2F9 582 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 COLQQ9Y215 455 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ARHGAP21Q5T5U3 1957 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 MYO9BQ13459 2157 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 C5orf42Q9H799 3197 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 LOC102723971A0A1B0GUV8 181 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 SHISA8B8ZZ34 492 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM150CB9EJG8 249 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 METTL15P1P0C7V9 234 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 PRSS12P56730 875 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 RPS18P62269 152 aaKnown RBP6.66□□□□□ -1.34
BRCA1-201ENST00000352993 GABREP78334 506 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 COTL1Q14019 142 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 FNDC7Q5VTL7 733 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 ASB10Q8WXI3 467 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 R3HDM4Q96D70 268 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 MS4A10Q96PG2 267 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 FBLN5Q9UBX5 448 aa6.66□□□□□ -1.34
BRCA1-201ENST00000352993 DNAH14Q0VDD8 3507 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 SIAH2O43255 324 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 ADAM20O43506 726 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 PITX3O75364 302 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 HOXA6P31267 233 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 CEACAM6P40199 344 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 TFPI2P48307 235 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 MTCP1P56278 107 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 RTP5Q14D33 572 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 H1FNTQ75WM6 255 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-201ENST00000352993 DOK3Q7L591 496 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 GRINAQ7Z429 371 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 YAF2Q8IY57 180 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 RNASEH2CQ8TDP1 164 aaKnown RBP6.65□□□□□ -1.34
BRCA1-201ENST00000352993 RSG1Q9BU20 258 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 LIME1Q9H400 295 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 RIMS4Q9H426 269 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-201ENST00000352993 ANAPC10Q9UM13 185 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 TRBV24-1A0A075B6N3 115 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM265A0A087WTH1 108 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 IGKV1-9A0A0C4DH69 117 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 SPRY1O43609 319 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-201ENST00000352993 CXCL10P02778 98 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 BCL2P10415 239 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 CD33P20138 364 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 TIPARPQ7Z3E1 657 aaKnown RBP6.65□□□□□ -1.34
BRCA1-201ENST00000352993 OR10S1Q8NGN2 331 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 SPIN2AQ99865 258 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 SPIN2BQ9BPZ2 258 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 PLK3Q9H4B4 646 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF160Q9HCG1 818 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms