RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 RTBDNQ9BSG5 229 aaPredicted RBP5.91□□□□□ -1.46
TRIM55-203ENST00000350034 CHIAQ9BZP6 476 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 OR2J1Q9GZK6 312 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 OPN3Q9H1Y3 402 aaPredicted RBP5.91□□□□□ -1.46
TRIM55-203ENST00000350034 PLK3Q9H4B4 646 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 IFT22Q9H7X7 185 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 EHFQ9NZC4 300 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 ANXA10Q9UJ72 324 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 AMDHD2Q9Y303 409 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 SLC25A15Q9Y619 301 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 ARHGAP21Q5T5U3 1957 aa5.91□□□□□ -1.46
TRIM55-203ENST00000350034 TRBV6-6A0A0A6YYG2 114 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 LRP5LA4QPB2 252 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 OR5H14A6NHG9 310 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 HMSDA8MTL9 139 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 MCRIP1C9JLW8 97 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 TRAPPC2LH3BP13 241 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 J3QKU1 62 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 SDCBPO00560 298 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 SIX6O95475 246 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 NAPSAO96009 420 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 HLA-AP01891 365 aaKnown RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 CECR9P0C854 216 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 KITLGP21583 273 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 CA6P23280 308 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 IL32P24001 234 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 NPY4RP50391 375 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 PER3P56645 1201 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 ERVS71-1P61550 626 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 TSPAN5P62079 268 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 SNRPD2P62316 118 aaKnown RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 PSG7Q13046 419 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 ALKBH6Q3KRA9 238 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 TMEM128Q5BJH2 165 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 SPATA46Q5T0L3 261 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 HAGHLQ6PII5 290 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 FAM180AQ6UWF9 173 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF767PQ75MW2 155 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 BHLHA15Q7RTS1 189 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 C1orf174Q8IYL3 243 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 RPRMLQ8N4K4 120 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 Q8NA96 180 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 OR1J1Q8NGS3 322 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 GRPEL2Q8TAA5 225 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 MAFIPQ8WZ33 124 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 EXTL1Q92935 676 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 MICU1Q9BPX6 476 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 RTL8AQ9BWD3 113 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 SFXN3Q9BWM7 321 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 LIME1Q9H400 295 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 C12orf4Q9NQ89 552 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF701Q9NV72 531 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-203ENST00000350034 TP53TG5Q9Y2B4 290 aa5.9□□□□□ -1.46
TRIM55-203ENST00000350034 MED12LQ86YW9 2145 aa5.9□□□□□ -1.47
TRIM55-203ENST00000350034 COL12A1Q99715 3063 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 TRAV14DV4A0A0A6YYC5 116 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 IGHV2OR16-5A0A0B4J2B6 119 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 IGHV1-18A0A0C4DH31 117 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 RFPL4AA6NLU0 287 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 TMEM210A6NLX4 147 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 POM121CA8CG34 1229 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 RFPL4AL1F8VTS6 287 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 NOS1APO75052 506 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 C1QL1O75973 258 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 OR7C1O76099 320 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 AGFG2O95081 481 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 CTSDP07339 412 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 OR5H8P0DN80 308 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 GLI4P10075 376 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 SLC25A4P12235 298 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 CXCL2P19875 107 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 HOXC12P31275 282 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 OPRM1P35372 400 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 MPV17P39210 176 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 UCP3P55916 312 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 SUPT4H1P63272 117 aaKnown RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 IL13RA1P78552 427 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 PDCD1Q15116 288 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 TIMM23BQ5SRD1 257 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 SHEQ5VZ18 495 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 MBNL2Q5VZF2 373 aaKnown RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 Q6P435 159 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF880Q6PDB4 577 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 TMEM65Q6PI78 240 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 FAM58AQ8N1B3 248 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 BHLHE23Q8NDY6 225 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 OR8G5Q8NG78 346 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 KLF14Q8TD94 323 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 DYRK2Q92630 601 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 CCDC120Q96HB5 630 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 PHB2Q99623 299 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 NRIP2Q9BQI9 281 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF2Q9BSG1 426 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 C1QTNF6Q9BXI9 259 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 BCL2L14Q9BZR8 327 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 TLNRD1Q9H1K6 362 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 OR51B6Q9H340 312 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF286AQ9HBT8 521 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms