RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SPACA1Q9HBV2 294 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 MBD2Q9UBB5 411 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 KCNIP3Q9Y2W7 256 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 FRYQ5TBA9 3013 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 SYNGR1O43759 233 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 SMPD2O60906 423 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 LYZL6O75951 148 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 RRASP10301 218 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 CBR1P16152 277 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 FCGR2CP31995 323 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 ALKAL2Q6UX46 152 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 CNEP1R1Q8N9A8 125 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 MARVELD3Q96A59 401 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 MICU1Q9BPX6 476 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 MEMO1Q9Y316 297 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 CFAP47Q6ZTR5 3102 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 F8VVB4 439 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 F8VWA3 439 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 LILRA1O75019 489 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 GLAP06280 429 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 COX5AP20674 150 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 CA6P23280 308 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 EIF2S3P41091 472 aaKnown RBP14.28□□□□□ -0.12
SAMM50-201ENST00000350028 IDH3GP51553 393 aaPredicted RBP14.28□□□□□ -0.12
SAMM50-201ENST00000350028 IL13RA2Q14627 380 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
SAMM50-201ENST00000350028 ACSF3Q4G176 576 aaPredicted RBP14.28□□□□□ -0.12
SAMM50-201ENST00000350028 PCNPQ8WW12 178 aaKnown RBP14.28□□□□□ -0.12
SAMM50-201ENST00000350028 ST8SIA2Q92186 375 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 MOB3AQ96BX8 217 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 RNF126Q9BV68 326 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 RTL8AQ9BWD3 113 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 WDR13Q9H1Z4 485 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 OR51I2Q9H344 312 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 MED9Q9NWA0 146 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 PRR13Q9NZ81 148 aa14.28□□□□□ -0.12
SAMM50-201ENST00000350028 J3QT63 122 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 NAPSAO96009 420 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 CELA3BP08861 270 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 LYL1P12980 280 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 RAC2P15153 192 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 SELEP16581 610 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 PRKACAP17612 351 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 ABCA11PQ4W5N1 156 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 PRSS54Q6PEW0 395 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 Q6ZPA2 131 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 POC1AQ8NBT0 407 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 GTF3AQ92664 365 aaKnown RBP14.27□□□□□ -0.12
SAMM50-201ENST00000350028 TOMM40LQ969M1 308 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 HS3ST6Q96QI5 342 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 RIMS4Q9H426 269 aaPredicted RBP14.27□□□□□ -0.12
SAMM50-201ENST00000350028 Q9N2K0 584 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 PLSCR4Q9NRQ2 329 aa14.27□□□□□ -0.12
SAMM50-201ENST00000350028 SPDEFO95238 335 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 HOXB5P09067 269 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 HOXC12P31275 282 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 PIGPP57054 158 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 HERV-K104P61576 105 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 IL15RAQ13261 267 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 VWA1Q6PCB0 445 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 MYPOPQ86VE0 399 aaPredicted RBP14.27□□□□□ -0.13
SAMM50-201ENST00000350028 SLC38A6Q8IZM9 456 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 FAM58AQ8N1B3 248 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 DCUN1D4Q92564 292 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 GALNT14Q96FL9 552 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 OR10C1Q96KK4 312 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 TAAR6Q96RI8 345 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 SYT3Q9BQG1 590 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 NAA60Q9H7X0 242 aa14.27□□□□□ -0.13
SAMM50-201ENST00000350028 A0A1W2PR80 420 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 IFNA21P01568 189 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 NMBP08949 121 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 PET100P0DJ07 73 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 NUP62P37198 522 aaPredicted RBP14.26□□□□□ -0.13
SAMM50-201ENST00000350028 UCP2P55851 309 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 FXYD4P59646 89 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 RBM39Q14498 530 aaKnown RBP14.26□□□□□ -0.13
SAMM50-201ENST00000350028 RGS7BPQ6MZT1 257 aaPredicted RBP14.26□□□□□ -0.13
SAMM50-201ENST00000350028 WDR31Q8NA23 367 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 ANGPTL6Q8NI99 470 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 ARPC5LQ9BPX5 153 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 SUCNR1Q9BXA5 334 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 OR2J1Q9GZK6 312 aa14.26□□□□□ -0.13
SAMM50-201ENST00000350028 KIR2DS1A0A191URI9 304 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 LRP5LA4QPB2 252 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 MPTX1A8MV57 137 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 IQCF6A8MYZ5 107 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 H0YIZ8 118 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 AADACP22760 399 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 KIR2DS4P43632 304 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 P2RX3P56373 397 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 KIR2DS1Q14954 304 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 AANATQ16613 207 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 UNQ6126/PRO20091Q6UXV3 157 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 CCDC71LQ8N9Z2 235 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 OR1J1Q8NGS3 322 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 SLC25A40Q8TBP6 338 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 NEK7Q8TDX7 302 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms