RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 GABREP78334 506 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 DLK1P80370 383 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SSX2Q16385 188 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 CDCP2Q5VXM1 449 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 Q6ZSR3 168 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 HSD17B11Q8NBQ5 300 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 NOXO1Q8NFA2 376 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 RAB24Q969Q5 203 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 BSCL2Q96G97 398 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 LIN37Q96GY3 246 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 BOD1Q96IK1 185 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 PIGQQ9BRB3 760 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 DDA1Q9BW61 102 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 ZNF700Q9H0M5 742 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 MMP24Q9Y5R2 645 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 A0A087X0M5 115 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 A0A1B0GX30 115 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 A0A1W2PP11 408 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 ZNF732B4DXR9 585 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 DVL1O14640 695 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 KLF7O75840 302 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 IGLV3-1P01715 115 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 IGHG1P01857 330 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 NR2C1P13056 603 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 CSNK1A1P48729 337 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 FHITP49789 147 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 RND2P52198 227 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 CLRN1P58418 232 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 EWSR1Q01844 656 aaKnown RBP eCLIP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 EXT1Q16394 746 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SP5Q6BEB4 398 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SPSB3Q6PJ21 355 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 OR2Y1Q8NGV0 311 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 OR2G3Q8NGZ4 309 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 RTN4IP1Q8WWV3 396 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 FAM71F1Q96KD3 344 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SSX3Q99909 188 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 RCL1Q9Y2P8 373 aaKnown RBP13.81□□□□□ -0.2
HMGA1-202ENST00000347617 R4GN57 208 aa13.81□□□□□ -0.2
HMGA1-202ENST00000347617 TRBV11-1A0A0K0K1C0 115 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 A0A0U1RQV5 110 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 A0A1B0GV90 55 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 ZNF726A6NNF4 738 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 RAMP1O60894 148 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 RD3LP0DJH9 198 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 CEACAM1P13688 526 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 SELLP14151 372 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 ZNF17P17021 662 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 RND3P61587 244 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 TLE4Q04727 773 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 C17orf67Q0P5P2 114 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 TMEM176BQ3YBM2 270 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-202ENST00000347617 SPNS3Q6ZMD2 512 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 FAM185AQ8N0U4 392 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
HMGA1-202ENST00000347617 PLEKHF2Q9H8W4 249 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 AKIRIN1Q9H9L7 192 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-202ENST00000347617 TMEM9BQ9NQ34 198 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 PLEKHJ1Q9NW61 149 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 AK3Q9UIJ7 227 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 DKKL1Q9UK85 242 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 PITPNC1Q9UKF7 332 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 V9GYS6 101 aa13.8□□□□□ -0.2
HMGA1-202ENST00000347617 PCNX3Q9H6A9 2034 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 IGKV1-9A0A0C4DH69 117 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 SMCO3A2RU48 225 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 LIPT2A6NK58 231 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 LY86O95711 162 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 CXCL1P09341 107 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 OR5AC1P0C628 307 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 FGF7P21781 194 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 MSX1P28360 303 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 H3F3AP84243 136 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 PCOLCEQ15113 449 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 OR2T2Q6IF00 324 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 FBXL14Q8N1E6 418 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 OR2C3Q8N628 320 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 ZNF283Q8N7M2 679 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 BEND2Q8NDZ0 799 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 HAS2Q92819 552 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 IMMP1LQ96LU5 166 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 C11orf1Q9H5F2 150 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 MED29Q9NX70 200 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 LOXL2Q9Y4K0 774 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 WSB1Q9Y6I7 421 aa13.79□□□□□ -0.2
HMGA1-202ENST00000347617 IGHV1-45A0A0A0MS14 117 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 DHRS7CA6NNS2 312 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 CDRT15L2A8MXV6 281 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 ETV2O00321 342 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-202ENST00000347617 TERTO14746 1132 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms