RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PITX3O75364 302 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 MFAP5Q13361 173 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 TP53RKQ96S44 253 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 A0A1W2PPQ1 181 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 CEBPZOSA8MTT3 80 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 ZNF705FA8MVS1 300 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 PPP5D1E7EU14 171 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 PROB1E7EW31 1015 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 H3BP45 60 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 IGHMP01871 453 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 HBE1P02100 147 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 ZNF705DP0CH99 300 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 ZNF705BP0CI00 300 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 ELLP55199 621 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 PRSS8Q16651 343 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 IQCJQ1A5X6 159 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 TMEM18Q96B42 140 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 R3HDM4Q96D70 268 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 PLEKHF2Q9H8W4 249 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 CHD3Q12873 2000 aaKnown RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 E9PLN8 166 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 MSTNO14793 375 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 CELA2BP08218 269 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 CST2P09228 141 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
LMNA-201ENST00000347559 GRINAQ7Z429 371 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 SLC37A2Q8TED4 501 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 MYOTQ9UBF9 498 aa13.36□□□□□ -0.27
LMNA-201ENST00000347559 PNRC1Q12796 327 aaPredicted RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 FOXF1Q12946 379 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 RTL6Q6ICC9 239 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 C16orf82Q7Z2V1 217 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 OR8G5Q8NG78 346 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 OR4D5Q8NGN0 318 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 GNPNAT1Q96EK6 184 aaPredicted RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 PCGF1Q9BSM1 259 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 SDF2L1Q9HCN8 221 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 SEMA5BQ9P283 1151 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 CTHP32929 405 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 PDCD1Q15116 288 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 SPEGQ15772 3267 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 FOXI3A8MTJ6 420 aaPredicted RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 F5H5K5 113 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 RPLP1P05386 114 aaKnown RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 WNT5AP41221 380 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 OR3A1P47881 315 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 HSD17B7P56937 341 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 FBXW4P57775 412 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 CLRN1P58418 232 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 GABREP78334 506 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 C1orf61Q13536 156 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 DOK3Q7L591 496 aa13.35□□□□□ -0.27
LMNA-201ENST00000347559 UBE2J1Q9Y385 318 aaPredicted RBP13.35□□□□□ -0.27
LMNA-201ENST00000347559 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
LMNA-201ENST00000347559 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
LMNA-201ENST00000347559 GNB2P62879 340 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 SPIN3Q5JUX0 258 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 ELOVL1Q9BW60 279 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 FRG2CA6NGY1 282 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
LMNA-201ENST00000347559 BCL2P10415 239 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 GZMHP20718 246 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 PRSS12P56730 875 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 HNF4GQ14541 408 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 RAB35Q15286 201 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 SLC25A26Q70HW3 274 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 BMFQ96LC9 184 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 VAX2Q9UIW0 290 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 MTCH2Q9Y6C9 303 aa13.34□□□□□ -0.27
LMNA-201ENST00000347559 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.27
LMNA-201ENST00000347559 ALG1L2C9J202 215 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 SEMA4FO95754 770 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 GNG10P50151 68 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 HERV-K104P61576 105 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 RTP5Q14D33 572 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 ARSJQ5FYB0 599 aaPredicted RBP13.33□□□□□ -0.27
LMNA-201ENST00000347559 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.27
LMNA-201ENST00000347559 OR5T1Q8NG75 326 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 RSG1Q9BU20 258 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 TMEM242Q9NWH2 141 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 V9GYS6 101 aa13.33□□□□□ -0.27
LMNA-201ENST00000347559 ADAM20O43506 726 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 CTSEP14091 401 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 ABLIM2Q6H8Q1 611 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 UEVLDQ8IX04 471 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms