RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SOD2P04179 222 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 RAE1P78406 368 aaKnown RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 OR8A1Q8NGG7 326 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 OR5B21A6NL26 309 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 EN2P19622 333 aaPredicted RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 P04436 131 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 CDKN2AP42771 156 aaKnown RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 SHHQ15465 462 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 ALG14Q96F25 216 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 EMDP50402 254 aa12.15□□□□□ -0.47
TRIO-202ENST00000344204 EDDM3BP56851 147 aa12.15□□□□□ -0.47
TRIO-202ENST00000344204 AUP1Q9Y679 476 aa12.15□□□□□ -0.47
TRIO-202ENST00000344204 TRBV5-3A0A0A0MS03 114 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 STARD6P59095 220 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 SRYQ05066 204 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 CDC14BO60729 498 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 OPN1LWP04000 364 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 FKBP1BP68106 108 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 HS3ST2Q9Y278 367 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 LRRC37A2A6NM11 1700 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 SNURFLB1AK76 121 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 RPS4Y1P22090 263 aaKnown RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 LTC4SQ16873 150 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 ADAMTSL4Q6UY14 1074 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 OR5AC2Q9NZP5 309 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 HS3ST1O14792 307 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 OR1C1Q15619 314 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 NUFIP2Q7Z417 695 aaKnown RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 MRGPREQ86SM8 312 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 GPX7Q96SL4 187 aaPredicted RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 THADAQ6YHU6 1953 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 RPS27P42677 84 aaKnown RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 MORN4Q8NDC4 146 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 AQP10Q96PS8 301 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 FUT3P21217 361 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 H0YL77 283 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 TIMP1P01033 207 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 FLT3LGP49771 235 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 PNLIPRP2P54317 469 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 OBP2BQ9NPH6 170 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 COMPP49747 757 aaPredicted RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 COX7A2P2O60397 106 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 CD8AP01732 235 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 MT-ND6P03923 174 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 SRD5A3Q9H8P0 318 aa12.14□□□□□ -0.47
TRIO-202ENST00000344204 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.14□□□□□ -0.47
TRIO-202ENST00000344204 ST6GAL1P15907 406 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 NPBWR2P48146 333 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 ZFP30Q9Y2G7 519 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 ZSWIM8A7E2V4 1837 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
TRIO-202ENST00000344204 PPICP45877 212 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 PPP2CBP62714 309 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 PPP2CAP67775 309 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 GPR62Q9BZJ7 368 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 B9D1Q9UPM9 204 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 SIRPB1O00241 398 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 DANCRP0C864 163 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 CST6Q15828 149 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 LDLRAD2Q5SZI1 272 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 PIAS3Q9Y6X2 628 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 C3orf85A0A1B0GTC6 90 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 TMEM255AQ5JRV8 349 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 BCORP1Q8N888 145 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 HPRT1P00492 218 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 MOB3AQ96BX8 217 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 MS4A6EQ96DS6 147 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 SLC26A1Q9H2B4 701 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 HELTA6NFD8 242 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
TRIO-202ENST00000344204 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 TXNRD2Q9NNW7 524 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 G6PCP35575 357 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 TCL1AP56279 114 aa12.13□□□□□ -0.47
TRIO-202ENST00000344204 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
TRIO-202ENST00000344204 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
TRIO-202ENST00000344204 LSRQ86X29 649 aaPredicted RBP12.12□□□□□ -0.47
TRIO-202ENST00000344204 TMEM25Q86YD3 366 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms