RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 BRICD5Q6PL45 260 aa18.65■□□□□ 0.58
CACNB1-201ENST00000344140 WDR82Q6UXN9 313 aa18.65■□□□□ 0.58
CACNB1-201ENST00000344140 SLC25A21Q9BQT8 299 aaPredicted RBP18.65■□□□□ 0.58
CACNB1-201ENST00000344140 C12orf4Q9NQ89 552 aa18.65■□□□□ 0.58
CACNB1-201ENST00000344140 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.64■□□□□ 0.57
CACNB1-201ENST00000344140 UBE2QL1A1L167 161 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 SHISA9B4DS77 424 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 MCRIP1C9JLW8 97 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 SPRY3O43610 288 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 IFNA6P05013 189 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 TNFSF4P23510 183 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 DUSP1P28562 367 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 SNTB1Q13884 538 aaKnown RBP18.64■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF146Q15072 292 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 VAX1Q5SQQ9 334 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 MEGF10Q96KG7 1140 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 GINS4Q9BRT9 223 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 HDHD3Q9BSH5 251 aaPredicted RBP18.64■□□□□ 0.57
CACNB1-201ENST00000344140 UFSP2Q9NUQ7 469 aa18.64■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF230Q9UIE0 474 aaPredicted RBP18.64■□□□□ 0.57
CACNB1-201ENST00000344140 DEGS1O15121 323 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 PEX14O75381 377 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 MICBQ29980 383 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 IDO2Q6ZQW0 420 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF826PQ6ZT77 177 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 OR5H2Q8NGV7 314 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 OR2V2Q96R30 315 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 SLC6A7Q99884 636 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 NEURL2Q9BR09 285 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 C1orf123Q9NWV4 160 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 ALG5Q9Y673 324 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 hCG_1807616A0A1W2PRN6 198 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 FCGR3AP08637 254 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 CFHR2P36980 270 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 RBM39Q14498 530 aaKnown RBP18.63■□□□□ 0.57
CACNB1-201ENST00000344140 CARTPTQ16568 116 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 DMRTC2Q8IXT2 367 aaPredicted RBP18.63■□□□□ 0.57
CACNB1-201ENST00000344140 OR10Z1Q8NGY1 313 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 DIRC2Q96SL1 478 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 FN3KRPQ9HA64 309 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 GLS2Q9UI32 602 aa18.63■□□□□ 0.57
CACNB1-201ENST00000344140 CHD6Q8TD26 2715 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 HIVEP3Q5T1R4 2406 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 CLDN14O95500 239 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 PMP2P02689 132 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 CSN2P05814 226 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 SERPINF1P36955 418 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 GATA4P43694 442 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 OR3A3P47888 321 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 CHRFAM7AQ494W8 412 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 Q6P435 159 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 ARRDC1Q8N5I2 433 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 SUMF2Q8NBJ7 301 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 OR5AP2Q8NGF4 316 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 IL19Q9UHD0 177 aa18.62■□□□□ 0.57
CACNB1-201ENST00000344140 ANKHD1Q8IWZ3 2542 aaKnown RBP18.61■□□□□ 0.57
CACNB1-201ENST00000344140 SH2D1BO14796 132 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 ARPC1BO15143 372 aaKnown RBP18.61■□□□□ 0.57
CACNB1-201ENST00000344140 PRAF2O60831 178 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF44P15621 663 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 DYRK2Q92630 601 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 RIMS4Q9H426 269 aaPredicted RBP18.61■□□□□ 0.57
CACNB1-201ENST00000344140 RASL12Q9NYN1 266 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 FLVCR2Q9UPI3 526 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 RNF115Q9Y4L5 304 aa18.61■□□□□ 0.57
CACNB1-201ENST00000344140 TRAV24A0A0B4J272 114 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 C7orf66A4D0T2 115 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 IGHV1-46P01743 117 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ADH4P08319 380 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 TRAPPC2P0DI81 140 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 TRAPPC2BP0DI82 140 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 GLRA1P23415 457 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 MECP2P51608 486 aaKnown RBP18.6■□□□□ 0.57
CACNB1-201ENST00000344140 TNFAIP6P98066 277 aaPredicted RBP18.6■□□□□ 0.57
CACNB1-201ENST00000344140 SMIM21Q3B7S5 101 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 SCGB2B2Q4G0G5 96 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ACP7Q6ZNF0 438 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 NEK7Q8TDX7 302 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 DPCDQ9BVM2 203 aaPredicted RBP18.6■□□□□ 0.57
CACNB1-201ENST00000344140 E7EQL1 145 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ZG16O60844 167 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 GMFBP60983 142 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF554Q86TJ5 538 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 TMEM17Q86X19 198 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 LRRC29Q8WV35 223 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ITLN1Q8WWA0 313 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ITLN2Q8WWU7 325 aaPredicted RBP18.6■□□□□ 0.57
CACNB1-201ENST00000344140 MAFIPQ8WZ33 124 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 CHMP1AQ9HD42 196 aaPredicted RBP18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ANXA10Q9UJ72 324 aa18.6■□□□□ 0.57
CACNB1-201ENST00000344140 ADGRG4Q8IZF6 3080 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 HMX3A6NHT5 357 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 HS3ST1O14792 307 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 SRSF7Q16629 238 aaKnown RBP eCLIP18.59■□□□□ 0.57
CACNB1-201ENST00000344140 AKAP14Q86UN6 197 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 GIMAP1Q8WWP7 306 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 ERGIC1Q969X5 290 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 ZNF286AQ9HBT8 521 aa18.59■□□□□ 0.57
CACNB1-201ENST00000344140 A0A0A6YYJ9 748 aa18.58■□□□□ 0.57
CACNB1-201ENST00000344140 PYCARD-AS1I3L0S3 204 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms