RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MPZL1O95297 269 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 IAPPP10997 89 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SLC25A6P12236 298 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 METAP1P53582 386 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SUCLG1P53597 346 aaKnown RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 IGFBP7Q16270 282 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 COX19Q49B96 90 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SLC25A26Q70HW3 274 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ROBO4Q8WZ75 1007 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CHST5Q9GZS9 411 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PLXNA2O75051 1894 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SLC31A2O15432 143 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CLN5O75503 358 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CBR3O75828 277 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ADRA2AP08913 450 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PEBP1P30086 187 aaKnown RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CD226Q15762 336 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HFEQ30201 348 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF600Q6ZNG1 722 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 MOB1BQ7L9L4 216 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 KCNE5Q9UJ90 142 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 A0A1B0GU03 582 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PIN1P1O15428 100 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FAM157BP0CG42 384 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HLA-GP17693 338 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 GLIPR1P48060 266 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PAFAH1B2P68402 229 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 C1orf100Q5SVJ3 147 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 OR8G5Q8NG78 346 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF596Q8TC21 504 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ANAPC1Q9H1A4 1944 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CHST1O43916 411 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GPM6AP51674 278 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR1D5P58170 312 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ELOBQ15370 118 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CLEC12BQ2HXU8 276 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 C5orf66Q9H5L9 145 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TIMM8AO60220 97 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 NGFRP08138 427 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HOXA6P31267 233 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TCTN1Q2MV58 587 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR10G4Q8NGN3 311 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR1F12Q8NHA8 337 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR2V1Q8NHB1 315 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR51B6Q9H340 312 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 FUT9Q9Y231 359 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 A0A1W2PNR3 127 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ACAA1P09110 424 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CDC34P49427 236 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 BHLHE23Q8NDY6 225 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HEATR5BQ9P2D3 2071 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 DXOO77932 396 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 PNPP00491 289 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ATP6V0CP27449 155 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GABRA4P48169 554 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 RTL8BQ17RB0 113 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LINC00596Q86U02 117 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CTHRC1Q96CG8 243 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 KIAA1324LA8MWY0 1029 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 DVL1O14640 695 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LURAP1LQ8IV03 231 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ADAT3Q96EY9 351 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 FKBP11Q9NYL4 201 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 MTCH2Q9Y6C9 303 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CENPVL1A0A0U1RR11 272 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ASCL1P50553 236 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 SLC38A11Q08AI6 406 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LHX8Q68G74 356 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LYZL2Q7Z4W2 148 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CISD2Q8N5K1 135 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GPBAR1Q8TDU6 330 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 DOK5Q9P104 306 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HELZP42694 1942 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF732B4DXR9 585 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 SYNGR2O43760 224 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR7C2O60412 319 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GNG4P50150 75 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HABP2Q14520 560 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR10V1Q8NGI7 309 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CALHM2Q9HA72 323 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ARL2-SNX15V9GYD0 113 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 PLXNB3Q9ULL4 1909 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 SPTY2D1-AS1A0A0U1RR47 76 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 RNF222A6NCQ9 220 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TRDCB7Z8K6 153 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 F8VVB4 439 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 F8VWA3 439 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GEMIN2O14893 280 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HOXA5P20719 270 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 SUB1P53999 127 aaKnown RBP eCLIP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 DCAF12Q5T6F0 453 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 REG4Q9BYZ8 158 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 PISDQ9UG56 409 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 HSF4Q9ULV5 492 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms