RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 MSGN1A6NI15 193 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 DFFBO76075 338 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 HPP00738 406 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 SERPINA7P05543 415 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 CTXN2P0C2S0 81 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 CALCRP30988 508 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 PDLIM3Q53GG5 364 aaPredicted RBP14.3□□□□□ -0.12
RDX-201ENST00000343115 ZNF468Q5VIY5 522 aaPredicted RBP14.3□□□□□ -0.12
RDX-201ENST00000343115 ZNF488Q96MN9 340 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 TMEM267Q0VDI3 215 aaPredicted RBP14.3□□□□□ -0.12
RDX-201ENST00000343115 ZNF345Q14585 488 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 RTL8AQ9BWD3 113 aa14.3□□□□□ -0.12
RDX-201ENST00000343115 PMP22Q01453 160 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 NHLH2Q02577 135 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ZNF574Q6ZN55 896 aaPredicted RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 NECAP1Q8NC96 275 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 LFNGQ8NES3 379 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 DEFB108BQ8NET1 73 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 OR6S1Q8NH40 331 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ZNF837Q96EG3 531 aaPredicted RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 TLNRD1Q9H1K6 362 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 NPTNQ9Y639 398 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ZNF705GA8MUZ8 300 aaPredicted RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 TMEM14DPA8MWL7 114 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 MPGP29372 298 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ZNF92Q03936 586 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 C17orf78Q8N4C9 275 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ZNF524Q96C55 264 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 HEYLQ9NQ87 328 aaPredicted RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 TMEM38BQ9NVV0 291 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ARPC4-TTLL3A0A0A6YYG9 625 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 PTAFRP25105 342 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 RAB4BP61018 213 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 TMPRSS7Q7RTY8 843 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 CT55Q8WUE5 264 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 RPUSD4Q96CM3 377 aaKnown RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 FZR1Q9UM11 496 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 TMED3Q9Y3Q3 217 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 NPIPB7O75200 414 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 PPYP01298 95 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 ARR3P36575 388 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 DVL1P1P54792 670 aaPredicted RBP14.29□□□□□ -0.12
RDX-201ENST00000343115 WDSUB1Q8N9V3 476 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 LHX4Q969G2 390 aa14.29□□□□□ -0.12
RDX-201ENST00000343115 CD74P04233 296 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 PSG4Q00888 419 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 ZNF816Q0VGE8 651 aaPredicted RBP14.28□□□□□ -0.12
RDX-201ENST00000343115 VAX1Q5SQQ9 334 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 TMEM178AQ8NBL3 297 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 TRIB1Q96RU8 372 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 SSX3Q99909 188 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 FAM173AQ9BQD7 235 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 OR2H1Q9GZK4 316 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 CCL28Q9NRJ3 127 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 ZNF319Q9P2F9 582 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 SHANK1Q9Y566 2161 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 TRAV14DV4A0A0A6YYC5 116 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 NKX2-6A6NCS4 301 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 IGHV3-13P01766 116 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 IGHV3-7P01780 117 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 MAGEA5P43359 124 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 TMEM50BP56557 158 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 ZNF239Q16600 458 aaKnown RBP14.28□□□□□ -0.12
RDX-201ENST00000343115 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 GNPNAT1Q96EK6 184 aaPredicted RBP14.28□□□□□ -0.12
RDX-201ENST00000343115 RSRP1Q9BUV0 290 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 SLC26A1Q9H2B4 701 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 METTL15P1P0C7V9 234 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 MUC1P15941 1255 aaPredicted RBP14.28□□□□□ -0.12
RDX-201ENST00000343115 PTGER4P35408 488 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 IGSF11Q5DX21 431 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 SLC7A10Q9NS82 523 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 KLF13Q9Y2Y9 288 aaPredicted RBP14.28□□□□□ -0.12
RDX-201ENST00000343115 PLXNA2O75051 1894 aa14.28□□□□□ -0.12
RDX-201ENST00000343115 SLC22A20A6NK97 555 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 KCNJ3P48549 501 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 ALKBH6Q3KRA9 238 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 GAPTQ8N292 157 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 OR1J1Q8NGS3 322 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 GPR35Q9HC97 309 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 PSENENQ9NZ42 101 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 STRAPQ9Y3F4 350 aaKnown RBP14.27□□□□□ -0.12
RDX-201ENST00000343115 SOX15O60248 233 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 GNG3P63215 75 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 FAM27BQ5VT28 67 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 RNF144BQ7Z419 303 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 RTN4RL2Q86UN3 420 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 POC1BQ8TC44 478 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 SLC25A28Q96A46 364 aa14.27□□□□□ -0.12
RDX-201ENST00000343115 CDK2AP1O14519 115 aa14.27□□□□□ -0.13
RDX-201ENST00000343115 HOXD4P09016 255 aaPredicted RBP14.27□□□□□ -0.13
RDX-201ENST00000343115 BCL3P20749 454 aa14.27□□□□□ -0.13
RDX-201ENST00000343115 MPLP40238 635 aa14.27□□□□□ -0.13
RDX-201ENST00000343115 GABRA4P48169 554 aa14.27□□□□□ -0.13
RDX-201ENST00000343115 LY6G6FQ5SQ64 297 aa14.27□□□□□ -0.13
RDX-201ENST00000343115 TGIF2Q9GZN2 237 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms