RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PGA5P0DJD9 388 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 PNLIPP16233 465 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 FAHP16930 419 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 EPHA1P21709 976 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 NKX2-1P43699 371 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 FASLGP48023 281 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 RPL23AP62750 156 aaKnown RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 C17orf67Q0P5P2 114 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF542PQ5EBM4 170 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 FAM185AQ8N0U4 392 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF296Q8WUU4 475 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 SNX22Q96L94 193 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 TP53RKQ96S44 253 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 SPIN2AQ99865 258 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 SPIN2BQ9BPZ2 258 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 GPR87Q9BY21 358 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 NKX2-4Q9H2Z4 354 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 THADAQ6YHU6 1953 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 IGHV5-51A0A0C4DH38 117 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 NKX2-6A6NCS4 301 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 EFNA2O43921 213 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 OTX1P32242 354 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 CEBPGP53567 150 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 RRADP55042 308 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 FXYD4P59646 89 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 MYBPHQ13203 477 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 OR8G1Q15617 311 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 EXT1Q16394 746 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF100Q8IYN0 542 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 MAML2Q8IZL2 1156 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 OR11L1Q8NGX0 322 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 CAPNS2Q96L46 248 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 FAAP24Q9BTP7 215 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 CRLF2Q9HC73 371 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 VDAC3Q9Y277 283 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 A0A087WZY1 265 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 GCGP01275 180 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 OPRM1P35372 400 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 PDLIM4P50479 330 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 TAS2R30P59541 319 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 C1orf61Q13536 156 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 OR8B8Q15620 311 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 ACSF3Q4G176 576 aaPredicted RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 DMRTC1Q5HYR2 192 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SLC25A26Q70HW3 274 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 H1FOOQ8IZA3 346 aaPredicted RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 OR1P1Q8NH06 330 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 PIGTQ969N2 578 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SPSB1Q96BD6 273 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 RBM14Q96PK6 669 aaKnown RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 DDA1Q9BW61 102 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 METTL9Q9H1A3 318 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SDF2L1Q9HCN8 221 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SOHLH2Q9NX45 425 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SLC7A11Q9UPY5 501 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 MYO7BQ6PIF6 2116 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 SNRPCP09234 159 aaKnown RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 BCL2P10415 239 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 DYNLT3P51808 116 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 GFERP55789 205 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 MTCP1P56278 107 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 HIST1H3AP68431 136 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 HNF4GQ14541 408 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 RAB35Q15286 201 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM31Q5JXX7 168 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 FOXL2NBQ6ZUU3 175 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 CMTM1Q8IZ96 169 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 MRGPRX4Q96LA9 322 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 CDCA3Q99618 268 aaPredicted RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 ATP5SQ99766 215 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 ELL3Q9HB65 397 aaPredicted RBP8.38□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF286AQ9HBT8 521 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 B3GALT1Q9Y5Z6 326 aa8.38□□□□□ -1.07
HOXA1-201ENST00000343060 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 H3BML4 177 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 EREGO14944 169 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 MPPED1O15442 326 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ID3Q02535 119 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 IL24Q13007 206 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 SLC10A1Q14973 349 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 NSDHLQ15738 373 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 NMSQ5H8A3 153 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 TGIF2LYQ8IUE0 185 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 OR10A7Q8NGE5 316 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 POC1BQ8TC44 478 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 CA5BP1Q8WTZ4 195 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 SIGLEC12Q96PQ1 595 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 P2RX4Q99571 388 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms