RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 ARRDC1Q8N5I2 433 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 TM4SF19Q96DZ7 209 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 SIGLEC11Q96RL6 698 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 DAPP1Q9UN19 280 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 RAB32Q13637 225 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 HOXC4P09017 264 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-203ENST00000340635 WNT5AP41221 380 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 RFESDQ8TAC1 157 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 HIST1H4GQ99525 98 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 ZNF576Q9H609 170 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-203ENST00000340635 ZGLP1P0C6A0 271 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-203ENST00000340635 PLEKHB1Q9UF11 243 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-203ENST00000340635 CD81P60033 236 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-203ENST00000340635 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 ERASQ7Z444 233 aa12.4□□□□□ -0.42
PDE4D-203ENST00000340635 IGKV3D-15A0A087WSY6 115 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 IGKV3-15P01624 115 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.43
PDE4D-203ENST00000340635 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 SYS1Q8N2H4 156 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 OR2A5Q96R48 311 aa12.4□□□□□ -0.43
PDE4D-203ENST00000340635 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 RNF165Q6ZSG1 346 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 OR4C13Q8NGP0 309 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 VN1R17PQ8TDU5 208 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 RALGAPA1Q6GYQ0 2036 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 TAPBPO15533 448 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 IGHV3-13P01766 116 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 PPICP45877 212 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 DYNLT3P51808 116 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 MRPL54Q6P161 138 aaKnown RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 COL25A1Q9BXS0 654 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 SNED1Q8TER0 1413 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 GPX2P18283 190 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 SNX22Q96L94 193 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 ZNF385DQ9H6B1 395 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 NPPBP16860 134 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 ISL1P61371 349 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 PKIAP61925 76 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 SPSB1Q96BD6 273 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 MS4A6EQ96DS6 147 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 PYCARD-AS1I3L0S3 204 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 PRSS2P07478 247 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 FABP5Q01469 135 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 CDK5R1Q15078 307 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 CCL26Q9Y258 94 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 DNAJC25-GNG10A0A024R161 153 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.439e-9■■■■■ 33
PDE4D-203ENST00000340635 GPX5O75715 221 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 AVPR2P30518 371 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 ISG20L2Q9H9L3 353 aaKnown RBP12.39□□□□□ -0.43
PDE4D-203ENST00000340635 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
PDE4D-203ENST00000340635 IGKV3D-11A0A0A0MRZ8 115 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 KCNAB3O43448 404 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 PRNTQ86SH4 94 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 ZDHHC22Q8N966 263 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 ANGPTL4Q9BY76 406 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 KLK11Q9UBX7 282 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 SRSF10O75494 262 aaKnown RBP12.38□□□□□ -0.43
PDE4D-203ENST00000340635 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 AESQ08117 197 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 PAQR6Q6TCH4 344 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 FAM219AQ8IW50 185 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 OR13C6PQ8NH95 151 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 FOXB1Q99853 325 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 DOCK5Q9H7D0 1870 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 SMIM18P0DKX4 95 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 PTGFRP43088 359 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 ZNF137PP52743 207 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 LRRC29Q8WV35 223 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
PDE4D-203ENST00000340635 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 EMDP50402 254 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 BAHD1Q8TBE0 780 aaPredicted RBP12.38□□□□□ -0.43
PDE4D-203ENST00000340635 FAM222BQ8WU58 562 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 TRAV38-1A0A0B4J264 116 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 A0A1W2PR80 420 aa12.38□□□□□ -0.43
PDE4D-203ENST00000340635 RBFOX3A6NFN3 312 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms