RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 KMT5CQ86Y97 462 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 C17orf78Q8N4C9 275 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 V9GYS6 101 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 DMDP11532 3685 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 SURF2Q15527 256 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-201ENST00000340437 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-201ENST00000340437 A0A0G2JMM0 328 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 A0A1W2PPB8 328 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 A0A1W2PRS3 328 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 KIR3DP1A8MWS1 328 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 GPR137BO60478 399 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 NR2C1P13056 603 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 NTF4P34130 210 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 CARD18P57730 90 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 CNN3Q15417 329 aaKnown RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 KLF2Q9Y5W3 355 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 YIF1AO95070 293 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 OR2C1O95371 312 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 RAB5AP20339 215 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 B2MP61769 119 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 FAM3AP98173 230 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 C15orf54Q8N8G6 183 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 TCEAL3Q969E4 200 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 BCO1Q9HAY6 547 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 PRR14LQ5THK1 2151 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 IFNA4P05014 189 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF16P17020 682 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 NDUFA6P56556 154 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 RPS19BP1Q86WX3 136 aaKnown RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 CALHM1Q8IU99 346 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 UBAC2Q8NBM4 344 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 LILRB1Q8NHL6 650 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 RHBDD1Q8TEB9 315 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 PHF7Q9BWX1 381 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-201ENST00000340437 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 ZDHHC8Q9ULC8 765 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
CPSF7-201ENST00000340437 TRAV39A0A0B4J263 110 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 ZIC3O60481 467 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 MT-ND4LP03901 98 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 DANCRP0C864 163 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 NKX2-1P43699 371 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SSR4P51571 173 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SSC4DQ8WTU2 575 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 PBDC1Q9BVG4 233 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 PKDREJQ9NTG1 2253 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SPTBN1Q01082 2364 aaKnown RBP12.47□□□□□ -0.41
CPSF7-201ENST00000340437 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 IGLV3-12A0A075B6K2 115 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 ADAM20O43506 726 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 CD63P08962 238 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPSF7-201ENST00000340437 TSC22D1Q15714 1073 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF674Q2M3X9 581 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SLC25A53Q5H9E4 307 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 IL1F10Q8WWZ1 152 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 PISDQ9UG56 409 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 MIOXQ9UGB7 285 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-201ENST00000340437 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
CPSF7-201ENST00000340437 TCN2P20062 427 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 CHATP28329 748 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 ZIC4Q8N9L1 334 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 TUBD1Q9UJT1 453 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
CPSF7-201ENST00000340437 PQLC2LA1A4F0 135 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 P2RY1P47900 373 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 PSG4Q00888 419 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 TMEM123Q8N131 208 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF611Q8N823 705 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF845Q96IR2 970 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-201ENST00000340437 SLC35B3Q9H1N7 401 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.41
CPSF7-201ENST00000340437 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 HS3ST1O14792 307 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 GAPDHP04406 335 aaKnown RBP12.46□□□□□ -0.42
CPSF7-201ENST00000340437 ATP6V0CP27449 155 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.42
CPSF7-201ENST00000340437 KCNMB1Q16558 191 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms