RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
CTSL-201ENST00000340342 ASCC1Q8N9N2 400 aaKnown RBP11.75□□□□□ -0.53
CTSL-201ENST00000340342 PNLDC1Q8NA58 520 aaKnown RBP11.75□□□□□ -0.53
CTSL-201ENST00000340342 OR4D6Q8NGJ1 314 aa11.75□□□□□ -0.53
CTSL-201ENST00000340342 CHCHD6Q9BRQ6 235 aa11.75□□□□□ -0.53
CTSL-201ENST00000340342 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
CTSL-201ENST00000340342 SSR3Q9UNL2 185 aa11.75□□□□□ -0.53
CTSL-201ENST00000340342 LOC100506127A0A0U1RQW1 187 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 KIR2DS1A0A191URI9 304 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 HTR3BO95264 441 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
CTSL-201ENST00000340342 CAV3P56539 151 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 FGF12P61328 243 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 PAX8Q06710 450 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 ZNF146Q15072 292 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 PDCD1Q15116 288 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 FIP1L1Q6UN15 594 aaKnown RBP11.74□□□□□ -0.53
CTSL-201ENST00000340342 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 ASCL4Q6XD76 172 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 NKAIN3Q8N8D7 197 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 PHYHIPQ92561 330 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 EXOSC4Q9NPD3 245 aaKnown RBP11.74□□□□□ -0.53
CTSL-201ENST00000340342 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
CTSL-201ENST00000340342 AUP1Q9Y679 476 aa11.74□□□□□ -0.53
CTSL-201ENST00000340342 A0A1W2PP11 408 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 TMEM82A0PJX8 343 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 H3BMQ9 156 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 K7N7A8 449 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 SIRPB1O00241 398 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 PSPNO60542 156 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 ZNF737O75373 536 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 ARL6IP5O75915 188 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 OR2H2O95918 312 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 TK1P04183 234 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 CHRM2P08172 466 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 SERPINA2P20848 420 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 GALP22466 123 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 MTNR1BP49286 362 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 LSM3P62310 102 aaKnown RBP11.73□□□□□ -0.53
CTSL-201ENST00000340342 SCN1BQ07699 218 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 AWAT2Q6E213 333 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 ELP2Q6IA86 826 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 GLIPR1L1Q6UWM5 242 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 S100A13Q99584 98 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 GFI1Q99684 422 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 MRI1Q9BV20 369 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 CHST6Q9GZX3 395 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 METTL9Q9H1A3 318 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 RHOFQ9HBH0 211 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 ZNF581Q9P0T4 197 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
CTSL-201ENST00000340342 SHISA3A0PJX4 238 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 MEX3AA1L020 520 aaKnown RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 SH2D1BO14796 132 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 ECDO95905 644 aaPredicted RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 GABRR1P24046 479 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 FGF9P31371 208 aaPredicted RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 VBP1P61758 197 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 C11orf91Q3C1V1 193 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 C22orf42Q6IC83 251 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 Q6P435 159 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 METAP1DQ6UB28 335 aaPredicted RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 LY6G5BQ8NDX9 201 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 C1orf147Q96MC9 270 aaPredicted RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 CENPOQ9BU64 300 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 SLITRK2Q9H156 845 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 TXNL4BQ9NX01 149 aaKnown RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 IL36GQ9NZH8 169 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 ONECUT1Q9UBC0 465 aa11.72□□□□□ -0.53
CTSL-201ENST00000340342 AK6Q9Y3D8 172 aaKnown RBP11.72□□□□□ -0.53
CTSL-201ENST00000340342 A0A1W2PQ09 198 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 SLC22A1O15245 554 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 GPR37O15354 613 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 CSTBP04080 98 aaKnown RBP11.71□□□□□ -0.53
CTSL-201ENST00000340342 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 ZNF44P15621 663 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 OR3A1P47881 315 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 NCS1P62166 190 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 ARF6P62330 175 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 CNPY1Q3B7I2 92 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 GLT8D1Q68CQ7 371 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 OR8H2Q8N162 312 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 Q8NFD4 153 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 OR4S1Q8NGB4 309 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
CTSL-201ENST00000340342 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms