RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 BMXP51813 675 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SCN1BQ07699 218 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 TRAM1Q15629 374 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 GDPD3Q7L5L3 318 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 OR8H2Q8N162 312 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 Q8N7P7 452 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 NR1H4Q96RI1 486 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 S100A13Q99584 98 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SLC6A7Q99884 636 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 TCF7L1Q9HCS4 588 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 CENPVL3A0A0U1RRI6 287 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 UCHL1P09936 223 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF44P15621 663 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SRMP19623 302 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 FPR2P25090 351 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 PSMA1P25786 263 aaKnown RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 GABRA5P31644 462 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 OR3A1P47881 315 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 DLX1P56177 255 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 EDDM3BP56851 147 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SRSF2Q01130 221 aaKnown RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 FABP5Q01469 135 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 PDCD1Q15116 288 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 GRK1Q15835 563 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SSX1Q16384 188 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 GPR157Q5UAW9 335 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 TMEM200BQ69YZ2 307 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 Q6P435 159 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 CDH26Q8IXH8 852 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 BPIFB2Q8N4F0 458 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 NKAIN3Q8N8D7 197 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 Q8NFD4 153 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 OR4S1Q8NGB4 309 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 LHX4Q969G2 390 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 MUL1Q969V5 352 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 IL36GQ9NZH8 169 aa12.54□□□□□ -0.4
UBE3B-201ENST00000340074 SOX21Q9Y651 276 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-201ENST00000340074 ATRQ13535 2644 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 A0A0G2JK05 382 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 MEGF11A6BM72 1044 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 DEGS1O15121 323 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 TCF21O43680 179 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 SERPINA2P20848 420 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 LMO1P25800 156 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 PRB3Q04118 309 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-201ENST00000340074 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 LRRTM1Q86UE6 522 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 LYPD6Q86Y78 171 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 OR51T1Q8NGJ9 327 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 TBC1D15Q8TC07 691 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
UBE3B-201ENST00000340074 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
UBE3B-201ENST00000340074 A0A1W2PP11 408 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
UBE3B-201ENST00000340074 M0R1W7 72 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-201ENST00000340074 MGST3O14880 152 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
UBE3B-201ENST00000340074 CCL3L1P16619 93 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 BLMHQ13867 455 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 ZNF273Q14593 569 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 KCTD21Q4G0X4 260 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 RUSC1-AS1Q66K80 236 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 AWAT2Q6E213 333 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 GLIPR1L1Q6UWM5 242 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 C1orf122Q6ZSJ8 110 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 OSR2Q8N2R0 312 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-201ENST00000340074 PPA2Q9H2U2 334 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 NDUFB11Q9NX14 153 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 ST3GAL6Q9Y274 331 aa12.52□□□□□ -0.41
UBE3B-201ENST00000340074 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-201ENST00000340074 PSMB9P28065 219 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 CHST4Q8NCG5 386 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 FCGR1BQ92637 280 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 C1orf147Q96MC9 270 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-201ENST00000340074 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-201ENST00000340074 UQCC2Q9BRT2 126 aa12.51□□□□□ -0.41
UBE3B-201ENST00000340074 SUCNR1Q9BXA5 334 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms