RNA–Protein interactions for RNA: ENST00000338732.7

LFNG-202, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 1,968 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-202ENST00000338732 SULT4A1Q9BR01 284 aa13.53□□□□□ -0.24
LFNG-202ENST00000338732 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
LFNG-202ENST00000338732 WASF3Q9UPY6 502 aa13.53□□□□□ -0.24
LFNG-202ENST00000338732 PIEZO1Q92508 2521 aa13.53□□□□□ -0.24
LFNG-202ENST00000338732 TNRC6AQ8NDV7 1962 aaKnown RBP13.53□□□□□ -0.24
LFNG-202ENST00000338732 NUDT19A8MXV4 375 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 APOC3P02656 99 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 HOXB5P09067 269 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 PMELP40967 661 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 IGFL3Q6UXB1 125 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 DPPA2Q7Z7J5 298 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 BPIFCQ8NFQ6 507 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 OR10AD1Q8NGE0 317 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 OR1S2Q8NGQ3 325 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 PIGCQ92535 297 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 SLC5A7Q9GZV3 580 aa13.52□□□□□ -0.24
LFNG-202ENST00000338732 TAAR5O14804 337 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 ZNF273Q14593 569 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 PLCXD3Q63HM9 321 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.25
LFNG-202ENST00000338732 APOBEC3DQ96AK3 386 aaPredicted RBP13.52□□□□□ -0.25
LFNG-202ENST00000338732 REPIN1Q9BWE0 567 aaKnown RBP13.52□□□□□ -0.25
LFNG-202ENST00000338732 SCNM1Q9BWG6 230 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 LIME1Q9H400 295 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 TUBD1Q9UJT1 453 aa13.52□□□□□ -0.25
LFNG-202ENST00000338732 CFAP47Q6ZTR5 3102 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 GEMIN2O14893 280 aaKnown RBP13.51□□□□□ -0.25
LFNG-202ENST00000338732 PLATP00750 562 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 FAM157CP0CG43 387 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 MALLQ13021 153 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 GUSBP1Q15486 140 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 SMUG1Q53HV7 270 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 FBXL14Q8N1E6 418 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 OR51F2Q8NH61 342 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 CNTNAP3BQ96NU0 1288 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 GSKIPQ9P0R6 139 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 SPTBN4Q9H254 2564 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 ZNF850A8MQ14 1090 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 TSPAN4O14817 238 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 SFTPBP07988 381 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 APLNRP35414 380 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 PLA2G5P39877 138 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 EIF5AP63241 154 aaKnown RBP13.51□□□□□ -0.25
LFNG-202ENST00000338732 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
LFNG-202ENST00000338732 PIGYQ3MUY2 71 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 Q8NFD4 153 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 OR56B2PQ8NGI1 322 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 GALNT14Q96FL9 552 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 MICU1Q9BPX6 476 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 ASF1BQ9NVP2 202 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 ST3GAL6Q9Y274 331 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
LFNG-202ENST00000338732 PDCD6O75340 191 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 NGFP01138 241 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 IFNA21P01568 189 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 IGHV1-2P23083 117 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 OPRM1P35372 400 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 MRPL21Q7Z2W9 205 aaKnown RBP13.5□□□□□ -0.25
LFNG-202ENST00000338732 MDP1Q86V88 176 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 KCNIP3Q9Y2W7 256 aa13.5□□□□□ -0.25
LFNG-202ENST00000338732 FRYQ5TBA9 3013 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 ZNF728P0DKX0 622 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 HKR1P10072 659 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 RBM11P57052 281 aaKnown RBP13.49□□□□□ -0.25
LFNG-202ENST00000338732 PIGPP57054 158 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 S100A10P60903 97 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 TMEM211Q6ICI0 200 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 Q6ZS92 163 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 SNIP1Q8TAD8 396 aaKnown RBP13.49□□□□□ -0.25
LFNG-202ENST00000338732 WNT2BQ93097 391 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 LRRC46Q96FV0 321 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 SPENQ96T58 3664 aaKnown RBP13.49□□□□□ -0.25
LFNG-202ENST00000338732 MED12LQ86YW9 2145 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 TMEM218A2RU14 115 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 WNT5AP41221 380 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 UCP3P55916 312 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 CNEP1R1Q8N9A8 125 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
LFNG-202ENST00000338732 NAA60Q9H7X0 242 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 C12orf4Q9NQ89 552 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A18PA6NE21 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A16PA6NEW6 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A20PA6NIJ5 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A8PA6NJQ4 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
LFNG-202ENST00000338732 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms