RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF154Q13106 437 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 IKZF1Q13422 519 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 SPIN3Q5JUX0 258 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 SHEQ5VZ18 495 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 ZNF660Q6AZW8 331 aaPredicted RBP13.83□□□□□ -0.2
HPS1-202ENST00000338546 FIP1L1Q6UN15 594 aaKnown RBP13.83□□□□□ -0.2
HPS1-202ENST00000338546 FN3KRPQ9HA64 309 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 SHPKQ9UHJ6 478 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 TINAGQ9UJW2 476 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 MGAQ8IWI9 3026 aa13.83□□□□□ -0.2
HPS1-202ENST00000338546 DCHS1Q96JQ0 3298 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 IGKV1D-8A0A087WSZ0 117 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 H7C1Q1 480 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 M0R1B8 84 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 IGHV3-13P01766 116 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 OR5H8P0DN80 308 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 CD34P28906 385 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 MDH2P40926 338 aaKnown RBP13.82□□□□□ -0.2
HPS1-202ENST00000338546 NKX6-1P78426 367 aaPredicted RBP13.82□□□□□ -0.2
HPS1-202ENST00000338546 IL13RA1P78552 427 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 SRSF4Q08170 494 aaKnown RBP13.82□□□□□ -0.2
HPS1-202ENST00000338546 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 ZNF146Q15072 292 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 ZGRF1Q86YA3 2104 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 POC1AQ8NBT0 407 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 OR2T35Q8NGX2 323 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 MAFIPQ8WZ33 124 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 CYYR1Q96J86 154 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 PHB2Q99623 299 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 GON7Q9BXV9 100 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
HPS1-202ENST00000338546 KIR2DS1A0A191URI9 304 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 SDCBPO00560 298 aaPredicted RBP13.81□□□□□ -0.2
HPS1-202ENST00000338546 MLNRO43193 412 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 RHBDL1O75783 438 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 SLC22A5O76082 557 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 CTXN2P0C2S0 81 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 SFTPCP11686 197 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 KIR2DS4P43632 304 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 NPY4RP50391 375 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 FABP6P51161 128 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 CASP6P55212 293 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 PPP1R1AQ13522 171 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 KIR2DS1Q14954 304 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 RND1Q92730 232 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 DMRTA2Q96SC8 542 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 TMPRSS13Q9BYE2 586 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 SLA2Q9H6Q3 261 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 HES4Q9HCC6 221 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 CA10Q9NS85 328 aa13.81□□□□□ -0.2
HPS1-202ENST00000338546 MAP1BP46821 2468 aaKnown RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 OR5H14A6NHG9 310 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 F5H5P2 479 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 SMLR1H3BR10 107 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 CDIPTO14735 213 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 DEGS1O15121 323 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 PTBP3O95758 552 aaKnown RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 CTSDP07339 412 aaPredicted RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 PPP3CBP16298 524 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 ID4P47928 161 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 UCP3P55916 312 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 PRR30Q53SZ7 412 aaPredicted RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 LIN54Q6MZP7 749 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 Q6P435 159 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 BRICD5Q6PL45 260 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 SUMF2Q8NBJ7 301 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 ZNF2Q9BSG1 426 aaPredicted RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 CHMP1AQ9HD42 196 aaPredicted RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 Q9N2K0 584 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 OPN4Q9UHM6 478 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 MGAT4AQ9UM21 535 aa13.8□□□□□ -0.2
HPS1-202ENST00000338546 C14orf166Q9Y224 244 aaKnown RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 HEATR1Q9H583 2144 aaKnown RBP13.8□□□□□ -0.2
HPS1-202ENST00000338546 IGLV3-9A0A075B6K5 115 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 GOSR2O14653 212 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 SFT2D2O95562 160 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 AKR1C4P17516 323 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 CD200P41217 278 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 SEC61A1P61619 476 aaKnown RBP13.79□□□□□ -0.2
HPS1-202ENST00000338546 ESPL1Q14674 2120 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 PDCD1Q15116 288 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 LAMTOR1Q6IAA8 161 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 SLC22A25Q6T423 547 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 Q6ZR03 302 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 C17orf107Q6ZR85 190 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 C9orf62Q8N4C0 152 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
HPS1-202ENST00000338546 ADAD2Q8NCV1 583 aaKnown RBP13.79□□□□□ -0.2
HPS1-202ENST00000338546 ST6GALNAC3Q8NDV1 305 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 DPCDQ9BVM2 203 aaPredicted RBP13.79□□□□□ -0.2
HPS1-202ENST00000338546 CLEC4MQ9H2X3 399 aaPredicted RBP13.79□□□□□ -0.2
HPS1-202ENST00000338546 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 TRAV24A0A0B4J272 114 aa13.79□□□□□ -0.2
HPS1-202ENST00000338546 C1QTNF9BB2RNN3 333 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms