RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 AK3Q9UIJ7 227 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CLDN16Q9Y5I7 305 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 C3orf85A0A1B0GTC6 90 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 HBE1P02100 147 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CD37P11049 281 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SNCAP37840 140 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ZFP36L1Q07352 338 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM54Q969K7 222 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 DENND4AQ7Z401 1863 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CDIPTO14735 213 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 EFNA2O43921 213 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 FABP1P07148 127 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TUBG1P23258 451 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF83P51522 516 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 OR4A16Q8NH70 328 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 FGF11Q92914 225 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 FBXO17Q96EF6 278 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NUDT16L1Q9BRJ7 211 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 HDHD3Q9BSH5 251 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 RCL1Q9Y2P8 373 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TMED3Q9Y3Q3 217 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SLC39A7Q92504 469 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 MEX3AA1L020 520 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 PRSS44E7EML9 344 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TSTD3H0UI37 97 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TOR1AO14656 332 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SPRY3O43610 288 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CD80P33681 288 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 FADS6Q8N9I5 356 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SOX7Q9BT81 388 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TRAF4Q9BUZ4 470 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM231Q9H6L2 316 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TAAR3PQ9P1P4 343 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 OR5AC1P0C628 307 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 AANATQ16613 207 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GFOD1Q9NXC2 390 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ALPK2Q86TB3 2170 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CACNA1HO95180 2353 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NME2P1O60361 137 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CST4P01036 141 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 BMP5P22003 454 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 P2RX3P56373 397 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 BAXQ07812 192 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ENDOGQ14249 297 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF610Q8N9Z0 462 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 RFESDQ8TAC1 157 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GNPNAT1Q96EK6 184 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GLRX2Q9NS18 164 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM14DPA8MWL7 114 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NTN3O00634 580 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 AGFG2O95081 481 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 HPNP05981 417 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 HBG1P69891 147 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 HBG2P69892 147 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SPANXN5Q5MJ07 72 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GFRALQ6UXV0 394 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NUFIP2Q7Z417 695 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 WFDC8Q8IUA0 241 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 C1orf87Q8N0U7 546 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 OR10V1Q8NGI7 309 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 OR2G3Q8NGZ4 309 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GALMQ96C23 342 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 MSI2Q96DH6 328 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 PRSS50Q9UI38 385 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 C1orf196B1AJZ1 125 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 GCSHP23434 173 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 FAM214BQ7L5A3 538 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NAA60Q9H7X0 242 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 DECR2Q9NUI1 292 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 NOTCH3Q9UM47 2321 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 A0A087WV48 116 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 CLPSP04118 112 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 AADACP22760 399 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 UBE2V2Q15819 145 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 KCNMB1Q16558 191 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PDLIM3Q53GG5 364 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ADAD2Q8NCV1 583 aaKnown RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 OR5T1Q8NG75 326 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 GMPPAQ96IJ6 420 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PUS1Q9Y606 427 aaKnown RBP eCLIP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PPYP01298 95 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM182Q6ZP80 229 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-202ENST00000338368 OR5B12Q96R08 314 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PRR13Q9NZ81 148 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TINAGQ9UJW2 476 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 E9PQ18 207 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM255AQ5JRV8 349 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PRAMEF5Q5TYX0 476 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PRAMEF6Q5VXH4 476 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 H2BFWTQ7Z2G1 175 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SLC38A6Q8IZM9 456 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SOSTQ9BQB4 213 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PLEKHA3Q9HB20 300 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 LOC101059948A0A1B0GTJ6 334 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 SCO1O75880 301 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 MPV17LQ2QL34 196 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 PXDC1Q5TGL8 231 aa5.48□□□□□ -1.53
PRKDC-202ENST00000338368 INO80CQ6PI98 192 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms