RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 A0A0G2JMP0 313 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A0X1KG70 313 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 KIR2DS1A0A191URI9 304 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1B0GW55 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 SHISA3A0PJX4 238 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 FUOMA2VDF0 154 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 KIAA1324LA8MWY0 1029 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 J3QLI3 93 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 SIRPB1O00241 398 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MPIG6BO95866 241 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 OR2H2O95918 312 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L2P0CJ85 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L3P0CJ86 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L4P0CJ87 422 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L5P0CJ88 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L6P0CJ89 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L7P0CJ90 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 VSIG8P0DPA2 414 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MGMTP16455 207 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 ZNF16P17020 682 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 RBM11P57052 281 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 OR10A3P58181 314 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MXD1Q05195 221 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM189A2Q15884 450 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 Q6P435 159 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4L9Q6RFH8 374 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 GDPD3Q7L5L3 318 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 OR2W3Q7Z3T1 314 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 CROCCP3Q8IVE0 287 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 OR4M2Q8NGB6 313 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 OR51D1Q8NGF3 324 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 C1orf147Q96MC9 270 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 NUDT16L1Q9BRJ7 211 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 URM1Q9BTM9 101 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 GSX1Q9H4S2 264 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 BANF2Q9H503 90 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 RNF167Q9H6Y7 350 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 SPACA1Q9HBV2 294 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 DUX4Q9UBX2 424 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 MAST4O15021 2626 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
SPTLC1-202ENST00000337841 TRBV23-1A0A0A0MS06 115 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PP11 408 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PPH5 198 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM82A0PJX8 343 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A10PA6NDY2 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A18PA6NE21 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A16PA6NEW6 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A20PA6NIJ5 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A8PA6NJQ4 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A7PA6NKC0 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A22PA8MWA6 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM14DPA8MWL7 114 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A12PA8MX19 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A5PA8MXJ8 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A23PA8MXZ1 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 AIPO00170 330 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 MGST3O14880 152 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 GEMIN2O14893 280 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM127O75204 238 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 ZNF737O75373 536 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 OR7C1O76099 320 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 IL1AP01583 271 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A15PP0C7V4 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A13PP0C7W8 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A14PP0C7W9 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM90A24PP0C7X0 464 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 SELLP14151 372 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 CLDN12P56749 244 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 KRTAP1-1Q07627 177 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 PDCD1Q15116 288 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 GRK1Q15835 563 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TAF9Q16594 264 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 ATAD3CQ5T2N8 411 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 OR8H2Q8N162 312 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TEX29Q8N6K0 151 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM104Q8NE00 496 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM46BQ96A09 425 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 DCTN5Q9BTE1 182 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 MRI1Q9BV20 369 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM59Q9BXS4 323 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 BARHL1Q9BZE3 327 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 C7orf69Q9H7B7 122 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 MMP26Q9NRE1 261 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 FBLN5Q9UBX5 448 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 RPUSD1Q9UJJ7 312 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 RAB22AQ9UL26 194 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 INSIG2Q9Y5U4 225 aa9.87□□□□□ -0.83
SPTLC1-202ENST00000337841 CSMD1Q96PZ7 3565 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 IGHV2-70DA0A0C4DH43 119 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PQ09 198 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 SMIM30A4D0T7 59 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 MCRIP1C9JLW8 97 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 SLC33A1O00400 549 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms