RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SERTAD4Q9NUC0 356 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 OAZ3Q9UMX2 235 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 DSCAML1Q8TD84 2053 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 TRGV10A0A0A0MS01 117 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 IGHV2-26A0A0B4J1V2 119 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 TRBV2A0A0J9YWF9 115 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 MEGF11A6BM72 1044 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 TOR1AO14656 332 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 IGHA1P01876 353 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 ISG15P05161 165 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 CALCBP10092 127 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 CD28P10747 220 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 BCL3P20749 454 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 AZGP1P25311 298 aaKnown RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 ERP29P30040 261 aaKnown RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 NPBWR2P48146 333 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF85Q03923 595 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 SCN1BQ07699 218 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF146Q15072 292 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 CCBE1Q6UXH8 406 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 UTS2BQ765I0 119 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 CENPVQ7Z7K6 275 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 RTN4RL2Q86UN3 420 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 Q8N2B8 174 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 TPRX1Q8N7U7 411 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 OR52N4Q8NGI2 321 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 OR13C3Q8NGS6 347 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 OR2G2Q8NGZ5 317 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 SGCDQ92629 289 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 SPSB1Q96BD6 273 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 RNFT2Q96EX2 444 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 EXOSC4Q9NPD3 245 aaKnown RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 RBFOX1Q9NWB1 397 aaKnown RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 HHLA2Q9UM44 414 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
CAPN3-202ENST00000337571 RRP15Q9Y3B9 282 aaKnown RBP8.59□□□□□ -1.03
CAPN3-202ENST00000337571 SAC3D1A6NKF1 404 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 LEUTXA8MZ59 168 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 J3QLW9 94 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 SIRPB1O00241 398 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 SLC16A6O15403 523 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 ENTPD6O75354 484 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 RPSAP08865 295 aaKnown RBP8.58□□□□□ -1.04
CAPN3-202ENST00000337571 HTR1AP08908 422 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF19P17023 458 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 CEACAM3P40198 252 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 KIR3DL2P43630 455 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 PRRX1P54821 245 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 P2RX3P56373 397 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 BLCAPP62952 87 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF91Q05481 1191 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 FBLN7Q53RD9 439 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 MEDAGQ5VYS4 303 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 CREB3L1Q96BA8 519 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 ADAT3Q96EY9 351 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-202ENST00000337571 OPALINQ96PE5 141 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 RHOFQ9HBH0 211 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 HMG20AQ9NP66 347 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 DPM3Q9P2X0 92 aa8.58□□□□□ -1.04
CAPN3-202ENST00000337571 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 IGKV1-9A0A0C4DH69 117 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 DEGS1O15121 323 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 PSPNO60542 156 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF44P15621 663 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 OR3A1P47881 315 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 CCR9P51686 369 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 ISL1P61371 349 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 AESQ08117 197 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 LDLRAD2Q5SZI1 272 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 C16orf82Q7Z2V1 217 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 ACBD7Q8N6N7 88 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 RFT1Q96AA3 541 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 MBOAT4Q96T53 435 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-202ENST00000337571 MMP28Q9H239 520 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 TAS2R3Q9NYW6 316 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 IL36RNQ9UBH0 155 aa8.57□□□□□ -1.04
CAPN3-202ENST00000337571 A6NJY4 79 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 MAGEB3O15480 346 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 OR2H2O95918 312 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 HCKP08631 526 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 TMEM225BP0DP42 221 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 PF4V1P10720 104 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 CD33P20138 364 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 CDK2P24941 298 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 MNDAP41218 407 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms