RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
SEC13-201ENST00000337354 ZNF737O75373 536 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 LY6G6DO95868 133 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 OR2H2O95918 312 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 VSIG8P0DPA2 414 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 ZNF44P15621 663 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 MGMTP16455 207 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 CEBPDP49716 269 aaPredicted RBP12.76□□□□□ -0.37
SEC13-201ENST00000337354 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
SEC13-201ENST00000337354 LSM3P62310 102 aaKnown RBP12.76□□□□□ -0.37
SEC13-201ENST00000337354 LCN2P80188 198 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM189A2Q15884 450 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 C2orf76Q3KRA6 126 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 Q6P435 159 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 GLCCI1Q86VQ1 547 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 TMEM185AQ8NFB2 350 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 RAB40AQ8WXH6 277 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 BCL7BQ9BQE9 202 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 MRI1Q9BV20 369 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 SPACA1Q9HBV2 294 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 LPAR2Q9HBW0 351 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 A0A0G2JK05 382 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 KIR2DS1A0A191URI9 304 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 A0A1B0GW55 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 A0A1W2PP11 408 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 TMEM14DPA8MWL7 114 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 TMBIM6P55061 237 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 SNU13P55769 128 aaKnown RBP12.75□□□□□ -0.37
SEC13-201ENST00000337354 QRFPP83859 136 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 MXD1Q05195 221 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 SCN1BQ07699 218 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 CTF1Q16619 201 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 HES5Q5TA89 166 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 SFXN4Q6P4A7 337 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4L9Q6RFH8 374 aaPredicted RBP12.75□□□□□ -0.37
SEC13-201ENST00000337354 BTNL3Q6UXE8 466 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 SLC16A12Q6ZSM3 486 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 ASCC1Q8N9N2 400 aaKnown RBP12.75□□□□□ -0.37
SEC13-201ENST00000337354 TMEM104Q8NE00 496 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 OR51D1Q8NGF3 324 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 ST8SIA4Q92187 359 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
SEC13-201ENST00000337354 SELENOIQ9C0D9 397 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
SEC13-201ENST00000337354 TRBV23-1A0A0A0MS06 115 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 A0A0G2JMP0 313 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 A0A0X1KG70 313 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 FUOMA2VDF0 154 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 MGST3O14880 152 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
SEC13-201ENST00000337354 PSPNO60542 156 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 TFF1P04155 84 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 NDUFB7P17568 137 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 GABRR1P24046 479 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 RPS19P39019 145 aaKnown RBP12.74□□□□□ -0.37
SEC13-201ENST00000337354 SCAND1P57086 179 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 VBP1P61758 197 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 NCS1P62166 190 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
SEC13-201ENST00000337354 PAX2Q02962 417 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 P2RY14Q15391 338 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 TAF9Q16594 264 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 CLVS1Q8IUQ0 354 aaPredicted RBP12.74□□□□□ -0.37
SEC13-201ENST00000337354 OR4M2Q8NGB6 313 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 RAB2BQ8WUD1 216 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 PTX4Q96A99 478 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 Q96M66 194 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 DCTN5Q9BTE1 182 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 BANF2Q9H503 90 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 LIN7BQ9HAP6 207 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 MTORP42345 2549 aa12.74□□□□□ -0.37
SEC13-201ENST00000337354 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 J3QLI3 93 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 SIRPB1O00241 398 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 SLC33A1O00400 549 aaPredicted RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 LDLRAD4O15165 306 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms