RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 C5orf24Q7Z6I8 188 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 NTNG2Q96CW9 530 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 TCEAL7Q9BRU2 100 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 METTL9Q9H1A3 318 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 FAM24AA6NFZ4 105 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 H7C1Q1 480 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 PHF1O43189 567 aaPredicted RBP17.25■□□□□ 0.35
CDCA4-201ENST00000336219 OMGP23515 440 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 RPS10P46783 165 aaKnown RBP17.25■□□□□ 0.35
CDCA4-201ENST00000336219 RSU1Q15404 277 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 EXT1Q16394 746 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 LYSMD4Q5XG99 296 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 ZNF343Q6P1L6 599 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 LIAT1Q6ZQX7 453 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 ZFP62Q8NB50 900 aaPredicted RBP17.25■□□□□ 0.35
CDCA4-201ENST00000336219 MSI2Q96DH6 328 aaKnown RBP17.25■□□□□ 0.35
CDCA4-201ENST00000336219 GGACTQ9BVM4 153 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 ZNF700Q9H0M5 742 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 SH2D2AQ9NP31 389 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 SDK2Q58EX2 2172 aa17.25■□□□□ 0.35
CDCA4-201ENST00000336219 IFITM10A6NMD0 228 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 SLC33A1O00400 549 aaPredicted RBP17.24■□□□□ 0.35
CDCA4-201ENST00000336219 NDUFS6O75380 124 aaKnown RBP17.24■□□□□ 0.35
CDCA4-201ENST00000336219 FBP1P09467 338 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 SSR4P51571 173 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 KDF1Q8NAX2 398 aaPredicted RBP17.24■□□□□ 0.35
CDCA4-201ENST00000336219 YPEL4Q96NS1 127 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 SRXN1Q9BYN0 137 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 PTRH2Q9Y3E5 179 aaKnown RBP17.24■□□□□ 0.35
CDCA4-201ENST00000336219 K7N7A8 449 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 GEMIN2O14893 280 aaKnown RBP17.24■□□□□ 0.35
CDCA4-201ENST00000336219 RAC1P63000 192 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 IL11RAQ14626 422 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 RAB35Q15286 201 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 HAGHQ16775 308 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 SOHLH1Q5JUK2 328 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 SUMF2Q8NBJ7 301 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 MR1Q95460 341 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 HSF4Q9ULV5 492 aa17.24■□□□□ 0.35
CDCA4-201ENST00000336219 CHATP28329 748 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 DUSP1P28562 367 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 EWSR1Q01844 656 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDCA4-201ENST00000336219 C9orf152Q5JTZ5 239 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 HEPN1Q6WQI6 88 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 Q6ZPA2 131 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 SLC35G3Q8N808 338 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 MALSU1Q96EH3 234 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 TP53RKQ96S44 253 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 PBDC1Q9BVG4 233 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 ST8SIA3O43173 380 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 SYNGR3O43761 229 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 KIAA0141Q14154 515 aaPredicted RBP17.23■□□□□ 0.35
CDCA4-201ENST00000336219 GPR157Q5UAW9 335 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 NAT6Q93015 286 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 GALNT14Q96FL9 552 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 GPHA2Q96T91 129 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 STRAPQ9Y3F4 350 aaKnown RBP17.23■□□□□ 0.35
CDCA4-201ENST00000336219 HS3ST3B1Q9Y662 390 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 URGCP-MRPS24S4R325 110 aa17.23■□□□□ 0.35
CDCA4-201ENST00000336219 CCDC163A0A0D9SF12 145 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
CDCA4-201ENST00000336219 HLA-BQ31612 363 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 GPR137CQ8N3F9 429 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 M1APQ8TC57 530 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 TMPRSS5Q9H3S3 457 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 KLK3P07288 261 aaPredicted RBP17.22■□□□□ 0.35
CDCA4-201ENST00000336219 DTYMKP23919 212 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 CNN3Q15417 329 aaKnown RBP17.22■□□□□ 0.35
CDCA4-201ENST00000336219 ZNF774Q6NX45 483 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 OR10AD1Q8NGE0 317 aa17.22■□□□□ 0.35
CDCA4-201ENST00000336219 IGKV1-12A0A0C4DH73 117 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 H0YL77 283 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 NXPH3O95157 252 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 IFNA17P01571 189 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 IGKV1D-12P01611 117 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 HTR5AP47898 357 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 NDUFA6P56556 154 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 OR2G3Q8NGZ4 309 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 SF3B5Q9BWJ5 86 aaKnown RBP17.21■□□□□ 0.35
CDCA4-201ENST00000336219 MAGT1Q9H0U3 335 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 IGSF23A1L1A6 192 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 NKX2-6A6NCS4 301 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 CBR3O75828 277 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 CXCL1P09341 107 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 ATP6V0CP27449 155 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 IL13RA2Q14627 380 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 OR2B11Q5JQS5 317 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 OR1F12Q8NHA8 337 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 IFI44Q8TCB0 444 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 MUCL1Q96DR8 90 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 BOD1Q96IK1 185 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 PAPOLGQ9BWT3 736 aaKnown RBP17.21■□□□□ 0.35
CDCA4-201ENST00000336219 TOLLIPQ9H0E2 274 aa17.21■□□□□ 0.35
CDCA4-201ENST00000336219 ZNF724A8MTY0 619 aa17.2■□□□□ 0.34
CDCA4-201ENST00000336219 AADACP22760 399 aa17.2■□□□□ 0.34
CDCA4-201ENST00000336219 NTF4P34130 210 aa17.2■□□□□ 0.34
CDCA4-201ENST00000336219 PYY3Q5JQD4 70 aa17.2■□□□□ 0.34
CDCA4-201ENST00000336219 SPSB3Q6PJ21 355 aa17.2■□□□□ 0.34
CDCA4-201ENST00000336219 RPS19BP1Q86WX3 136 aaKnown RBP17.2■□□□□ 0.34
CDCA4-201ENST00000336219 LGI3Q8N145 548 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms