RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PITX3O75364 302 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 CST9Q5W186 159 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 UBALD2Q8IYN6 164 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 NCOA6Q14686 2063 aaPredicted RBP9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 JOSD1Q15040 202 aaPredicted RBP9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 PRTGQ2VWP7 1150 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 IGSF8Q969P0 613 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 OR6C1Q96RD1 312 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 STRCQ7RTU9 1775 aa9.28□□□□□ -0.92
SPTBN1-201ENST00000333896 GJB5O95377 273 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 SP1P08047 785 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 NUTF2P61970 127 aaKnown RBP9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 CD226Q15762 336 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 DEFB133Q30KQ1 61 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 PRSS36Q5K4E3 855 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 MORN1Q5T089 497 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 DLK2Q6UY11 383 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 CALHM3Q86XJ0 350 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 GALMQ96C23 342 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 KTI12Q96EK9 354 aaPredicted RBP9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 C20orf141Q9NUB4 165 aa9.27□□□□□ -0.92
SPTBN1-201ENST00000333896 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 CTAG2O75638 210 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 IGHV3-9P01782 118 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 MUC1P15941 1255 aaPredicted RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 SERF2P84101 59 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 MICBQ29980 383 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 SSX8Q7RTT4 187 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TEX29Q8N6K0 151 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ANAPC1Q9H1A4 1944 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 IGHA1P01876 353 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 KLF9Q13886 244 aaPredicted RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 Q6ZSR6 202 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TMEM179BQ7Z7N9 219 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 HSPB9Q9BQS6 159 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 FAM71E1Q6IPT2 247 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 NPEPL1Q8NDH3 523 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 OR2I1PQ8NGU4 316 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 FBXO17Q96EF6 278 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 P2RY12Q9H244 342 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TRGC2P03986 189 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TMIGD3P0DMS9 266 aaPredicted RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 WNT3P56703 355 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 MDGA1Q8NFP4 955 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TMEM167BQ9NRX6 74 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 STARD10Q9Y365 291 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ICAM2P13598 275 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 C17orf67Q0P5P2 114 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ETFBKMTQ8IXQ9 262 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 OR4C13Q8NGP0 309 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 ABHD1Q96SE0 405 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 POLDIP2Q9Y2S7 368 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 KIR2DS3Q14952 304 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 RNF165Q6ZSG1 346 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 TP53I13Q8NBR0 393 aaPredicted RBP9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 DERL3Q96Q80 235 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 SFXN1Q9H9B4 322 aa9.27□□□□□ -0.93
SPTBN1-201ENST00000333896 LOC107986453A0A1B0GWG9 222 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 PRKRAO75569 313 aaKnown RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 VAMP5O95183 116 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 HNRNPA1L2Q32P51 320 aaKnown RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 COX20Q5RI15 118 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 OR1B1Q8NGR6 318 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TMEM40Q8WWA1 233 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ZFP64Q9NPA5 681 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SLC7A10Q9NS82 523 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ONECUT1Q9UBC0 465 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 R4GMQ9 66 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SIGLEC1Q9BZZ2 1709 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 HNRNPA1P09651 372 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 BCL2P10415 239 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TRAT1Q6PIZ9 186 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 NHLRC1Q6VVB1 395 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 PTPMT1Q8WUK0 201 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 DERL1Q9BUN8 251 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 MTCH2Q9Y6C9 303 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SMIM13P0DJ93 91 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 CLDN18P56856 261 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SLC25A35Q3KQZ1 300 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 C1QL4Q86Z23 238 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 CLEC4DQ8WXI8 215 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 JKAMPQ9P055 326 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 THADAQ6YHU6 1953 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 MED19A0JLT2 244 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TLCD2A6NGC4 264 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 OR1L1Q8NH94 360 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TINAGQ9UJW2 476 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ZMIZ1Q9ULJ6 1067 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TRAV39A0A0B4J263 110 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 MARCH11A6NNE9 402 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms