RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 A0A1W2PPB8 328 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 A0A1W2PRS3 328 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 KIR3DP1A8MWS1 328 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 ST8SIA3O43173 380 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 PHF1O43189 567 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-201ENST00000330045 CXCL13O43927 109 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 P04436 131 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 CEACAM16Q2WEN9 425 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 PLCXD3Q63HM9 321 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 C12orf57Q99622 126 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 COA4Q9NYJ1 87 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 ZDHHC8Q9ULC8 765 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 CAMLGP49069 296 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 GUK1Q16774 197 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 C15orf54Q8N8G6 183 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 CCDC71LQ8N9Z2 235 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 RSRP1Q9BUV0 290 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 RNF122Q9H9V4 155 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 RPS10P5Q9NQ39 176 aa13.28□□□□□ -0.28
BRCC3-201ENST00000330045 FOLR2P14207 255 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 AADACP22760 399 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 PAX6P26367 422 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 FOLR3P41439 243 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 UCP2P55851 309 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 RBM11P57052 281 aaKnown RBP13.27□□□□□ -0.29
BRCC3-201ENST00000330045 PCBD1P61457 104 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 HERV-K104P61576 105 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 NHLH2Q02577 135 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 ZFP36L1Q07352 338 aaKnown RBP13.27□□□□□ -0.29
BRCC3-201ENST00000330045 TMEM211Q6ICI0 200 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 C14orf79Q96F83 325 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 CLCC1Q96S66 551 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF442Q9H7R0 627 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF816-ZNF321PA0A0X1KG74 233 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 FUT3P21217 361 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 AKR1C3P42330 323 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 FHITP49789 147 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 OR8B8Q15620 311 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 Q6ZPA2 131 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
BRCC3-201ENST00000330045 C19orf12Q9NSK7 152 aa13.27□□□□□ -0.29
BRCC3-201ENST00000330045 RCL1Q9Y2P8 373 aaKnown RBP13.27□□□□□ -0.29
BRCC3-201ENST00000330045 OR7C1O76099 320 aaPredicted RBP13.26□□□□□ -0.29
BRCC3-201ENST00000330045 PRH1P02810 166 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 GLAP06280 429 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 RAB5CP51148 216 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.26□□□□□ -0.29
BRCC3-201ENST00000330045 SLC35G3Q8N808 338 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 OR10D3Q8NH80 312 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 EGLN1Q9GZT9 426 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
BRCC3-201ENST00000330045 PPYP01298 95 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 RFPL3SP0C7P2 107 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 RAB5BP61020 215 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 TRA2AQ13595 282 aaKnown RBP eCLIP13.25□□□□□ -0.29
BRCC3-201ENST00000330045 GNMTQ14749 295 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 RIPPLY2Q5TAB7 128 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 ABLIM2Q6H8Q1 611 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
BRCC3-201ENST00000330045 CALHM1Q8IU99 346 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 HSD17B11Q8NBQ5 300 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 OR4D5Q8NGN0 318 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 HPSE2Q8WWQ2 592 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 TECTBQ96PL2 329 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 GPR35Q9HC97 309 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 P4HTMQ9NXG6 502 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 STRAPQ9Y3F4 350 aaKnown RBP13.25□□□□□ -0.29
BRCC3-201ENST00000330045 C3orf85A0A1B0GTC6 90 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 C1QL1O75973 258 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 IFNA4P05014 189 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 EDN3P14138 238 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 PMELP40967 661 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF611Q8N823 705 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
BRCC3-201ENST00000330045 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF587BE7ETH6 402 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 MPPED1O15442 326 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 TRAPPC6AO75865 159 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 SNRNP70P08621 437 aaKnown RBP13.24□□□□□ -0.29
BRCC3-201ENST00000330045 NOVA1P51513 510 aaKnown RBP13.24□□□□□ -0.29
BRCC3-201ENST00000330045 HABP2Q14520 560 aaPredicted RBP13.24□□□□□ -0.29
BRCC3-201ENST00000330045 AWAT1Q58HT5 328 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 IGSF11Q5DX21 431 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 WIPI1Q5MNZ9 446 aaPredicted RBP13.24□□□□□ -0.29
BRCC3-201ENST00000330045 SLC25A26Q70HW3 274 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 BATF2Q8N1L9 274 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 ADGRG7Q96K78 797 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 SPACA1Q9HBV2 294 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 PARPBPQ9NWS1 579 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 CDX4O14627 284 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms