RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ERVFRD-1P60508 538 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 MEF2CQ06413 473 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 EDDM3AQ14507 147 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 GRK1Q15835 563 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 ZNF529Q6P280 563 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 CRIP3Q6Q6R5 217 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 ZNF485Q8NCK3 441 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 EXOSC4Q9NPD3 245 aaKnown RBP22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 GSTK1Q9Y2Q3 226 aa22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 SIRT4Q9Y6E7 314 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-201ENST00000329231 ZNF728P0DKX0 622 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 ZP1P60852 638 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 OR52N4Q8NGI2 321 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 MYDGFQ969H8 173 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 TMEM106AQ96A25 262 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 CHST6Q9GZX3 395 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 RAB26Q9ULW5 256 aa22.54■■□□□ 1.2
ATPAF1-201ENST00000329231 hADV38S2A0JD32 116 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 C17orf98A8MV24 154 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 PTGES3LE9PB15 166 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 MGST3O14880 152 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 MYL12BO14950 172 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 PSPNO60542 156 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 RBP4P02753 201 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 CDK1P06493 297 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 DLX6P56179 175 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 TAF15Q92804 592 aaKnown RBP eCLIP22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 GPER1Q99527 375 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 ZNF747Q9BV97 191 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 TAS2R4Q9NYW5 299 aa22.53■■□□□ 1.2
ATPAF1-201ENST00000329231 FBN3Q75N90 2809 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 POM121CA8CG34 1229 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 OR2H2O95918 312 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 LALBAP00709 142 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 BMXP51813 675 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 RNLSQ5VYX0 342 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 DMKNQ6E0U4 476 aaPredicted RBP22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 SATL1Q86VE3 508 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 OR4S1Q8NGB4 309 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 OR51A2Q8NGJ7 313 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 GHSRQ92847 366 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 ZNF714Q96N38 554 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 ERGIC3Q9Y282 383 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 TPRKBQ9Y3C4 175 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 TENM1Q9UKZ4 2725 aa22.52■■□□□ 1.2
ATPAF1-201ENST00000329231 SIRPB1O00241 398 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 GPR137BO60478 399 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 OMGP23515 440 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 COX7A1P24310 79 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 WNT4P56705 351 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 TAS2R43P59537 309 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 PPP3R1P63098 170 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 ZNF782Q6ZMW2 699 aaPredicted RBP22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 GDPGP1Q6ZNW5 385 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 NANOGP1Q8N7R0 232 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 BEND2Q8NDZ0 799 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 PXT1Q8NFP0 134 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 OR4F5Q8NH21 305 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 C1RLQ9NZP8 487 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 MMP24Q9Y5R2 645 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 LINC00312Q9Y6C7 94 aa22.51■■□□□ 1.19
ATPAF1-201ENST00000329231 A0A1B0GUS0 222 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 NDUFA7O95182 113 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 MDKP21741 143 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 LMO1P25800 156 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 ERP29P30040 261 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 OR3A1P47881 315 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 MTNR1BP49286 362 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 RAG2P55895 527 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 LGALS4P56470 323 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 TAF9Q16594 264 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 YIF1BQ5BJH7 314 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 ASPHD2Q6ICH7 369 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 SHISA2Q6UWI4 295 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 CHST4Q8NCG5 386 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 OR5R1Q8NH85 324 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 CNBD2Q96M20 576 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 CDCA4Q9BXL8 241 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 PAK1IP1Q9NWT1 392 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 VPREB3Q9UKI3 123 aa22.5■■□□□ 1.19
ATPAF1-201ENST00000329231 MEX3AA1L020 520 aaKnown RBP22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 FUOMA2VDF0 154 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 ALDOBP05062 364 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 ZNF44P15621 663 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 SLC35A2P78381 396 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 ELP2Q6IA86 826 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 TPRX1Q8N7U7 411 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 OR13D1Q8NGV5 346 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 TNFAIP8L1Q8WVP5 186 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 BEX1Q9HBH7 125 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 TMEM138Q9NPI0 162 aa22.49■■□□□ 1.19
ATPAF1-201ENST00000329231 TRBV5-5A0A0J9YX44 114 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 GABRPO00591 440 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 P2RX3P56373 397 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 SCN1BQ07699 218 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 TCF23Q7RTU1 214 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 ZFP41Q8N8Y5 198 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 C17orf50Q8WW18 174 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 MND1Q9BWT6 205 aa22.48■■□□□ 1.19
ATPAF1-201ENST00000329231 FAM192AQ9GZU8 254 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms