RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 FBXO7Q9Y3I1 522 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 CXCL2P19875 107 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 SCCPDHQ8NBX0 429 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 SH2D1BO14796 132 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 CD59P13987 128 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 CBR1P16152 277 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 MRPL24Q96A35 216 aaKnown RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 MRPL13Q9BYD1 178 aaKnown RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 OPN3Q9H1Y3 402 aaPredicted RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 KIF25Q9UIL4 384 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 RFPL4AA6NLU0 287 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 RFPL4AL1F8VTS6 287 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 NTN3O00634 580 aaPredicted RBP13.92□□□□□ -0.18
SYNM-201ENST00000328642 GABRA1P14867 456 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 AADACP22760 399 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 ERVS71-1P61550 626 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 FBXW9Q5XUX1 488 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 NARFLQ9H6Q4 476 aa13.92□□□□□ -0.18
SYNM-201ENST00000328642 A0A1B0GTI1 187 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 A0A1W2PNV4 684 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 OR2W3Q7Z3T1 314 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 LYZL2Q7Z4W2 148 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 C2orf50Q96LR7 162 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 DHRS7CA6NNS2 312 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 HMGB3O15347 200 aaKnown RBP13.91□□□□□ -0.18
SYNM-201ENST00000328642 IFNA4P05014 189 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 OR13C7P0DN81 318 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 BTCP35070 178 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 PTGDSP41222 190 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 RPL23AP62750 156 aaKnown RBP13.91□□□□□ -0.18
SYNM-201ENST00000328642 GGNBP1Q5YKI7 109 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 BAP18Q8IXM2 172 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 POLDIP2Q9Y2S7 368 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 A0A0U1RQK1 487 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 RRP8O43159 456 aaKnown RBP13.91□□□□□ -0.18
SYNM-201ENST00000328642 PTGER4P35408 488 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 PLAC9Q5JTB6 97 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 IL36RNQ9UBH0 155 aa13.91□□□□□ -0.18
SYNM-201ENST00000328642 TNFSF4P23510 183 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 RAG2P55895 527 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 NKX6-1P78426 367 aaPredicted RBP13.9□□□□□ -0.18
SYNM-201ENST00000328642 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 KCNJ16Q9NPI9 418 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 ENSAO43768 121 aaKnown RBP13.9□□□□□ -0.18
SYNM-201ENST00000328642 RCC1P18754 421 aaPredicted RBP13.9□□□□□ -0.18
SYNM-201ENST00000328642 OR3A1P47881 315 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 TESK1Q15569 626 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 IZUMO4Q1ZYL8 232 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 SFT2D1Q8WV19 159 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 ACTL6BO94805 426 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 IFNA10P01566 189 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 POLR2GP62487 172 aaKnown RBP eCLIP13.9□□□□□ -0.18
SYNM-201ENST00000328642 RGS7BPQ6MZT1 257 aaPredicted RBP13.9□□□□□ -0.18
SYNM-201ENST00000328642 OR5M8Q8NGP6 311 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 FAM96BQ9Y3D0 163 aa13.9□□□□□ -0.18
SYNM-201ENST00000328642 EIF3GO75821 320 aaKnown RBP eCLIP13.9□□□□□ -0.19
SYNM-201ENST00000328642 MPGP29372 298 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 CEACAM6P40199 344 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 CALHM1Q8IU99 346 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 OR6S1Q8NH40 331 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 RNF141Q8WVD5 230 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 AIFM2Q9BRQ8 373 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 SPACA1Q9HBV2 294 aa13.9□□□□□ -0.19
SYNM-201ENST00000328642 FAM24AA6NFZ4 105 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 LINC01387J3KSC0 135 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 SFT2D2O95562 160 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 DUS4LO95620 317 aaKnown RBP13.89□□□□□ -0.19
SYNM-201ENST00000328642 ISG15P05161 165 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 ZNF17P17021 662 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 FPR2P25090 351 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
SYNM-201ENST00000328642 C1orf100Q5SVJ3 147 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 RPL7L1Q6DKI1 246 aaKnown RBP13.89□□□□□ -0.19
SYNM-201ENST00000328642 BTNL3Q6UXE8 466 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 Q6ZRG5 221 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 BMPERQ8N8U9 685 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
SYNM-201ENST00000328642 PTPN13Q12923 2485 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 IGHV3OR15-7A0A075B7D8 119 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 IGKV1-9A0A0C4DH69 117 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 ERVH48-1M5A8F1 160 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 OPN1MWP04001 364 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 OPN1MW2P0DN77 364 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 OPN1MW3P0DN78 364 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 TMEM50BP56557 158 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 ZP1P60852 638 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 OR2F1Q13607 317 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 LPCAT3Q6P1A2 487 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 RPS4Y2Q8TD47 263 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 ZNF891A8MT65 544 aaPredicted RBP13.89□□□□□ -0.19
SYNM-201ENST00000328642 SCTP09683 121 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 ERVK-16P61578 105 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 LCN15Q6UWW0 184 aa13.89□□□□□ -0.19
SYNM-201ENST00000328642 FADS6Q8N9I5 356 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms