RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MMACHCQ9Y4U1 282 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 TDRD6O60522 2096 aaKnown RBP11.1□□□□□ -0.63
CCDC60-201ENST00000327554 XKRY2A2RUG3 117 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 CST7O76096 145 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 CD55P08174 381 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 KIR2DL1P43626 348 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-201ENST00000327554 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
CCDC60-201ENST00000327554 PDLIM4P50479 330 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 DCAF7P61962 342 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 GABREP78334 506 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 DPPA3Q6W0C5 159 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 MEX3BQ6ZN04 569 aaKnown RBP11.1□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF283Q8N7M2 679 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 NKX2-4Q9H2Z4 354 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
CCDC60-201ENST00000327554 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 VAX2Q9UIW0 290 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 M0R143 59 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 SSSCA1O60232 199 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM50AO95807 157 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 TPSD1Q9BZJ3 242 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
CCDC60-201ENST00000327554 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
CCDC60-201ENST00000327554 BCL2P10415 239 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 MMP9P14780 707 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 COL9A1P20849 921 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 DTYMKP23919 212 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 EFNA3P52797 238 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 PAX5Q02548 391 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 PIGTQ969N2 578 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 MOB3AQ96BX8 217 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 GAB2Q9UQC2 676 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 KIAA2026Q5HYC2 2103 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 KIR2DS5A0A0G2JLQ3 304 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 A0A0G2JNG1 304 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 KIR2DS3K7RE56 304 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 JMJD7P0C870 316 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 CTSEP14091 401 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 FAHP16930 419 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 SMAD4Q13485 552 aaKnown RBP11.09□□□□□ -0.63
CCDC60-201ENST00000327554 KIR2DS5Q14953 304 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 MPV17LQ2QL34 196 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-201ENST00000327554 HLA-DQA1Q5Y7H0 255 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 WDR25Q64LD2 544 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM217Q8N7C4 229 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 P4HTMQ9NXG6 502 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
CCDC60-201ENST00000327554 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 POU2F2P09086 479 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 HNRNPA2B1P22626 353 aaKnown RBP11.08□□□□□ -0.64
CCDC60-201ENST00000327554 UCP3P55916 312 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 TAS2R30P59541 319 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 HHEXQ03014 270 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 CLN3Q13286 438 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM234Q8WY98 164 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 DYRK2Q92630 601 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF665Q9H7R5 613 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 RTTNQ86VV8 2226 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 CHD3Q12873 2000 aaKnown RBP11.08□□□□□ -0.64
CCDC60-201ENST00000327554 A0A1W2PNV4 684 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 LIPT2A6NK58 231 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 ZFP92A6NM28 416 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM150CB9EJG8 249 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 DLEU1O43261 78 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 GZMHP20718 246 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 CLRN1P58418 232 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 DCAF10Q5QP82 559 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 H1FOOQ8IZA3 346 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-201ENST00000327554 PGAM5Q96HS1 289 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 THOC3Q96J01 351 aaKnown RBP11.08□□□□□ -0.64
CCDC60-201ENST00000327554 PLA2G2FQ9BZM2 168 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 LRFN1Q9P244 771 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 V9GYS6 101 aa11.08□□□□□ -0.64
CCDC60-201ENST00000327554 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM210A6NLX4 147 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 KLF8O95600 359 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-201ENST00000327554 MMP7P09237 267 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-201ENST00000327554 FGF5P12034 268 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 VAMP2P63027 116 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 TFF2Q03403 129 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 BAXQ07812 192 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms