RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PTHLHP12272 177 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DCTN2Q13561 401 aaKnown RBP8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 PDCD1Q15116 288 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 HFEQ30201 348 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 ATAD3CQ5T2N8 411 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 HACD4Q5VWC8 232 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 TEX36Q5VZQ5 186 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 ZFAND2BQ8WV99 257 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 CCL17Q92583 94 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 RDH5Q92781 318 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 DLL4Q9NR61 685 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 PLEKHJ1Q9NW61 149 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 OR14J1Q9UGF5 321 aa8.6□□□□□ -1.03
VIPAS39-201ENST00000327028 OOEPA6NGQ2 149 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 OR2AT4A6NND4 320 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 LGALS8O00214 317 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 DEGS1O15121 323 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 RP2O75695 350 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 OR2H2O95918 312 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 LPLP06858 475 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 CSF3P09919 207 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 IL7P13232 177 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF44P15621 663 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SSTR2P30874 369 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 CDKN1AP38936 164 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 BAK1Q16611 211 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM201AQ5SY85 155 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 OLFML2AQ68BL7 652 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 OR8H2Q8N162 312 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 OR52I2Q8NH67 350 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 GPX8Q8TED1 209 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 YIPF5Q969M3 257 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 TRIM63Q969Q1 353 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 CCL19Q99731 98 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF222Q9UK12 451 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 ELF5Q9UKW6 265 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 IGHV3OR15-7A0A075B7D8 119 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 TRAV24A0A0B4J272 114 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 RFPL4AA6NLU0 287 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 RFPL4AL1F8VTS6 287 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SIRPB1O00241 398 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SLC33A1O00400 549 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 PSG2P11465 335 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 MUC1P15941 1255 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 CEBPDP49716 269 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 GNG2P59768 71 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SCN1BQ07699 218 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 RNASE12Q5GAN4 147 aaKnown RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 TRIQKQ629K1 86 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 STUMQ69YW2 141 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 C16orf87Q6PH81 154 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SUMF2Q8NBJ7 301 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 CYYR1Q96J86 154 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 SULT4A1Q9BR01 284 aa8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 THAP7Q9BT49 309 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 DPCDQ9BVM2 203 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 RBMX2Q9Y388 322 aaKnown RBP8.59□□□□□ -1.03
VIPAS39-201ENST00000327028 IGKV1D-17A0A075B6S4 117 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 DAOP14920 347 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 LMO1P25800 156 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 MICBQ29980 383 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 CD177Q8N6Q3 437 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 C19orf18Q8NEA5 215 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 ANGPTL6Q8NI99 470 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 NUDCD2Q8WVJ2 157 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 FAM210AQ96ND0 272 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 FAAP24Q9BTP7 215 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 ABCB10Q9NRK6 738 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 AK3Q9UIJ7 227 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PPIAL4EA0A075B759 164 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 TRAV38-1A0A0B4J264 116 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 MCRIP1C9JLW8 97 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PPIAL4DF5H284 164 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 SSX5O60225 188 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 FSTL3O95633 263 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 CD3GP09693 182 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PPIAL4FP0DN26 164 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 COL8A2P25067 703 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PRDX2P32119 198 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 EFNA4P52798 201 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 SSBP1Q04837 148 aaKnown RBP8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 RBM39Q14498 530 aaKnown RBP8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PAN3Q58A45 887 aaKnown RBP8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 SHEQ5VZ18 495 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 SFRP4Q6FHJ7 346 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 TRAPPC6BQ86SZ2 158 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PPIAL4AQ9Y536 164 aa8.58□□□□□ -1.04
VIPAS39-201ENST00000327028 PTPN13Q12923 2485 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 A0A1W2PQ09 198 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 UBE2QL1A1L167 161 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 LYNX1G3V0Z9 82 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 LANCL1O43813 399 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF205O95201 554 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 LYNX1P0DP58 116 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 GDNFP39905 211 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 MDH2P40926 338 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms