RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CSPG4Q6UVK1 2322 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 SPINT2O43291 252 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 MPC2O95563 127 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 PPP1CBP62140 327 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 DEFA6Q01524 100 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 RBPJQ06330 500 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 CHRNA10Q9GZZ6 450 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 DECR2Q9NUI1 292 aa10.32□□□□□ -0.76
DDR1-223ENST00000324771 TRBV5-7A0A0A0MS05 114 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 ZFP92A6NM28 416 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 OR2F1Q13607 317 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 PNLIPRP3Q17RR3 467 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 PHYHD1Q5SRE7 291 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
DDR1-223ENST00000324771 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 CTDSPLO15194 276 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 RGS7BPQ6MZT1 257 aaPredicted RBP10.31□□□□□ -0.76
DDR1-223ENST00000324771 Q6ZRG5 221 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 OR2W3Q7Z3T1 314 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 NUFIP2Q7Z417 695 aaKnown RBP10.31□□□□□ -0.76
DDR1-223ENST00000324771 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 LHFPL5Q8TAF8 219 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 LINC01387J3KSC0 135 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 GPR137BO60478 399 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 HPNP05981 417 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 TBPP20226 339 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 H3F3CQ6NXT2 135 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 MRGPRDQ8TDS7 321 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 MARC2Q969Z3 335 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 RBMXL1Q96E39 390 aaKnown RBP10.31□□□□□ -0.76
DDR1-223ENST00000324771 ZNF319Q9P2F9 582 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 C9orf172C9J069 976 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
DDR1-223ENST00000324771 CST2P09228 141 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 MSMO1Q15800 293 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 HAGHQ16775 308 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 OR11L1Q8NGX0 322 aa10.31□□□□□ -0.76
DDR1-223ENST00000324771 KRBOX1C9JBD0 128 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 CFDP00746 253 aaPredicted RBP10.3□□□□□ -0.76
DDR1-223ENST00000324771 S100A2P29034 98 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 RAG2P55895 527 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 PDZK1IP1Q13113 114 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 FAM209BQ5JX69 171 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 ZNF826PQ6ZT77 177 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 FDCSPQ8NFU4 85 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SLC25A40Q8TBP6 338 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 DEPPQ9NTK1 212 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 GBF1Q92538 1859 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SNCAP37840 140 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 OR3A1P47881 315 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 IGFBP7Q16270 282 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SSX2Q16385 188 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 TMEM123Q8N131 208 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SUMF2Q8NBJ7 301 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SSX3Q99909 188 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 SLC25A32Q9H2D1 315 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 C7orf66A4D0T2 115 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 NPIPB7O75200 414 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 CLPSP04118 112 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 GP1BAP07359 652 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 AADACP22760 399 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 FPR2P25090 351 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 CEACAM6P40199 344 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 NPBWR2P48146 333 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 OR14K1Q8NGZ2 314 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
DDR1-223ENST00000324771 LRRC46Q96FV0 321 aa10.3□□□□□ -0.76
DDR1-223ENST00000324771 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 FAM24AA6NFZ4 105 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 MPPED1O15442 326 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 SFT2D2O95562 160 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 SSBP1Q04837 148 aaKnown RBP10.29□□□□□ -0.76
DDR1-223ENST00000324771 BAXQ07812 192 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
DDR1-223ENST00000324771 PRAMEF6Q5VXH4 476 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 FBXW9Q5XUX1 488 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 FAM96BQ9Y3D0 163 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 TANC1Q9C0D5 1861 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 MYO18BQ8IUG5 2567 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 ZNF891A8MT65 544 aaPredicted RBP10.29□□□□□ -0.76
DDR1-223ENST00000324771 C1orf196B1AJZ1 125 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 DUS4LO95620 317 aaKnown RBP10.29□□□□□ -0.76
DDR1-223ENST00000324771 IFI6P09912 130 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 FOXG1P55316 489 aaPredicted RBP10.29□□□□□ -0.76
DDR1-223ENST00000324771 POLR2GP62487 172 aaKnown RBP eCLIP10.29□□□□□ -0.76
DDR1-223ENST00000324771 PRAMEF5Q5TYX0 476 aa10.29□□□□□ -0.76
DDR1-223ENST00000324771 RCL1Q9Y2P8 373 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms