RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 EXTL1Q92935 676 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 TSNAXQ99598 290 aaKnown RBP19.24■□□□□ 0.67
PNKP-201ENST00000322344 ZNF629Q9UEG4 869 aaPredicted RBP19.24■□□□□ 0.67
PNKP-201ENST00000322344 KMT2EQ8IZD2 1858 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 LRP3O75074 770 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 AADACP22760 399 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 BLOC1S1P78537 153 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 PLP2Q04941 152 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 PDCD1Q15116 288 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 MCEMP1Q8IX19 187 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 MKXQ8IYA7 352 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 MSI2Q96DH6 328 aaKnown RBP19.24■□□□□ 0.67
PNKP-201ENST00000322344 FER1L6-AS2Q96M78 137 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 FBXL17Q9UF56 701 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 AMDHD2Q9Y303 409 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 TECTAO75443 2155 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 M0R296 226 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 ABCD4O14678 606 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 SP1P08047 785 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 BCL3P20749 454 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 DUSP1P28562 367 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 SULT1A2P50226 295 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 SRPXP78539 464 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 MPV17LQ2QL34 196 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 Q6ZPA2 131 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 DPPA2Q7Z7J5 298 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 HPSE2Q8WWQ2 592 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 DOCK10Q96BY6 2186 aa19.23■□□□□ 0.67
PNKP-201ENST00000322344 KLRC4-KLRK1H3BQV0 150 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 NME2P1O60361 137 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 ZNF205O95201 554 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 SCGB1D2O95969 90 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 PPYP01298 95 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 MBPP02686 304 aaPredicted RBP19.22■□□□□ 0.67
PNKP-201ENST00000322344 NME2P22392 152 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 HAAOP46952 286 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 MEOX1P50221 254 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 RAB1AP62820 205 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 C10orf91Q5T1B1 145 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 OR5A2Q8NGI9 324 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 OR5L1Q8NGL2 311 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 GLYATL2Q8WU03 294 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 SLAMF9Q96A28 289 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 POM121L2Q96KW2 1035 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 RCC2Q9P258 522 aaKnown RBP19.22■□□□□ 0.67
PNKP-201ENST00000322344 TMED3Q9Y3Q3 217 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 TRIM77I1YAP6 450 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 SIGLEC5O15389 551 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 FOXG1P55316 489 aaPredicted RBP19.22■□□□□ 0.67
PNKP-201ENST00000322344 TMEM33P57088 247 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 LYZL2Q7Z4W2 148 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 OR4A4PQ8NGN8 299 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 HIST1H2AAQ96QV6 131 aa19.22■□□□□ 0.67
PNKP-201ENST00000322344 CARHSP1Q9Y2V2 147 aaKnown RBP19.22■□□□□ 0.67
PNKP-201ENST00000322344 NUPL2O15504 423 aaKnown RBP19.21■□□□□ 0.67
PNKP-201ENST00000322344 DIRAS3O95661 229 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 GPM6AP51674 278 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 GPR157Q5UAW9 335 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 UBAC2Q8NBM4 344 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 MDS2Q8NDY4 140 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 OR5T2Q8NGG2 359 aa19.21■□□□□ 0.67
PNKP-201ENST00000322344 FGF23Q9GZV9 251 aaPredicted RBP19.21■□□□□ 0.67
PNKP-201ENST00000322344 ZNF503-AS2A6NEH8 195 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 ZNF732B4DXR9 585 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 TRAPPC2LH3BP13 241 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 CDX4O14627 284 aaPredicted RBP19.2■□□□□ 0.66
PNKP-201ENST00000322344 CCL2P13500 99 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 IL13RA2Q14627 380 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 LINC00596Q86U02 117 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 PLK3Q9H4B4 646 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 Q9N2K0 584 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 PHF1O43189 567 aaPredicted RBP19.2■□□□□ 0.66
PNKP-201ENST00000322344 GPR137BO60478 399 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 MED6O75586 246 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 NAPSAO96009 420 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 RCC1P18754 421 aaPredicted RBP19.2■□□□□ 0.66
PNKP-201ENST00000322344 TREM1Q9NP99 234 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 PARP11Q9NR21 331 aa19.2■□□□□ 0.66
PNKP-201ENST00000322344 F8W036 122 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 CAV2P51636 162 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 ARHGDIBP52566 201 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 AKR1C2P52895 323 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 AKR1C1Q04828 323 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 SPAG16Q8N0X2 631 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 OR11L1Q8NGX0 322 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 HRH4Q9H3N8 390 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 IL17BQ9UHF5 180 aa19.19■□□□□ 0.66
PNKP-201ENST00000322344 KIR2DS1A0A191URI9 304 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 CD300LBA8K4G0 201 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 MPPED1O15442 326 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 TK1P04183 234 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 ADCYAP1P18509 176 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 KIR2DS4P43632 304 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 P2RY1P47900 373 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 RND3P61587 244 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 KIR2DS1Q14954 304 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 SLC10A1Q14973 349 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 FBXW12Q6X9E4 464 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 NUFIP2Q7Z417 695 aaKnown RBP19.18■□□□□ 0.66
PNKP-201ENST00000322344 SEC11CQ9BY50 192 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms