RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 COA4Q9NYJ1 87 aa10.71□□□□□ -0.7
RNF4-201ENST00000314289 GHRLQ9UBU3 117 aa10.71□□□□□ -0.7
RNF4-201ENST00000314289 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.7
RNF4-201ENST00000314289 BSNQ9UPA5 3926 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 FIGNL2A6NMB9 653 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 SLC25A4P12235 298 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 HAAOP46952 286 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 PDZK1IP1Q13113 114 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 OR8B8Q15620 311 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 UQCC3Q6UW78 93 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 OR10AD1Q8NGE0 317 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 SLAMF9Q96A28 289 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 C10orf35Q96D05 121 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 PHYHIPLQ96FC7 376 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 ZNF107Q9UII5 783 aaPredicted RBP10.7□□□□□ -0.7
RNF4-201ENST00000314289 FAM96BQ9Y3D0 163 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 PTPRBP23467 1997 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 PCNX1Q96RV3 2341 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 ZNF724A8MTY0 619 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 OR7C1O76099 320 aaPredicted RBP10.7□□□□□ -0.7
RNF4-201ENST00000314289 GLI4P10075 376 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 MEOX2P50222 304 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 TMEM42Q69YG0 159 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 RPUSD3Q6P087 351 aaKnown RBP10.7□□□□□ -0.7
RNF4-201ENST00000314289 TM2D1Q9BX74 207 aa10.7□□□□□ -0.7
RNF4-201ENST00000314289 RAB19A4D1S5 217 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 XRCC2O43543 280 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 ADAP1O75689 374 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 CRYBA1P05813 215 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 RBMXP38159 391 aaKnown RBP10.69□□□□□ -0.7
RNF4-201ENST00000314289 PRDX4Q13162 271 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 PNLIPRP3Q17RR3 467 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 AADACL3Q5VUY0 350 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 LPCAT3Q6P1A2 487 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 MDP1Q86V88 176 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 EMG1Q92979 244 aaKnown RBP10.69□□□□□ -0.7
RNF4-201ENST00000314289 ARL11Q969Q4 196 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 TMEM230Q96A57 120 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 ZNF488Q96MN9 340 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 NUDT16L1Q9BRJ7 211 aaKnown RBP10.69□□□□□ -0.7
RNF4-201ENST00000314289 PRDM14Q9GZV8 571 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 ZDHHC11Q9H8X9 412 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 RPL36A-HNRNPH2H7BZ11 118 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 WNT5AP41221 380 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 SWI5Q1ZZU3 235 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 ALKBH2Q6NS38 261 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 ZSCAN4Q8NAM6 433 aaPredicted RBP10.69□□□□□ -0.7
RNF4-201ENST00000314289 OR5AP2Q8NGF4 316 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 PHB2Q99623 299 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 OR2S2Q9NQN1 319 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 TM4SF5O14894 197 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 CBR1P16152 277 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 FUT6P51993 359 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 PLP2Q04941 152 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 FBXW9Q5XUX1 488 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 COLCA1Q6ZS62 124 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 HPSE2Q8WWQ2 592 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
RNF4-201ENST00000314289 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 LIME1Q9H400 295 aa10.69□□□□□ -0.7
RNF4-201ENST00000314289 RELNP78509 3460 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 SERPINE3A8MV23 424 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 BCL3P20749 454 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 ZDHHC22Q8N966 263 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 TOMM40LQ969M1 308 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 MARS2Q96GW9 593 aaKnown RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 ZNF2Q9BSG1 426 aaPredicted RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 CHMP1AQ9HD42 196 aaPredicted RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 SNAPINO95295 136 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 IDH3GP51553 393 aaPredicted RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 FXYD4P59646 89 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 RBM39Q14498 530 aaKnown RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 AVPI1Q5T686 147 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 OR4A4PQ8NGN8 299 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 OR1K1Q8NGR3 316 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 PIK3IP1Q96FE7 263 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 RTBDNQ9BSG5 229 aaPredicted RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 GPR132Q9UNW8 380 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 KIAA2026Q5HYC2 2103 aa10.68□□□□□ -0.7
RNF4-201ENST00000314289 HEATR1Q9H583 2144 aaKnown RBP10.68□□□□□ -0.7
RNF4-201ENST00000314289 ZNF732B4DXR9 585 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SERPINF1P36955 418 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 MALLQ13021 153 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 VAX1Q5SQQ9 334 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 DHRS7BQ6IAN0 325 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms