RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ADAT1Q9BUB4 502 aaKnown RBP7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM202A6NGA9 273 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ZGLP1P0C6A0 271 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 CISD3P0C7P0 127 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 VMA21Q3ZAQ7 101 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF439Q8NDP4 499 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM9BQ9NQ34 198 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ARL2-SNX15V9GYD0 113 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ICOSLGO75144 302 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 CBX7O95931 251 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 BRS3P32247 399 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 C6orf15Q6UXA7 325 aaPredicted RBP7.83□□□□□ -1.16
COL6A5-202ENST00000312481 C3orf85A0A1B0GTC6 90 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 IGSF23A1L1A6 192 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 WBP2Q969T9 261 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 MCHR2Q969V1 340 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 A0A1B0GW64 132 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 FAM90A9PA6NNJ1 464 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 A8MXK9 166 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 AKR1C3P42330 323 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 ADGRG7Q96K78 797 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 PHF7Q9BWX1 381 aaPredicted RBP7.83□□□□□ -1.16
COL6A5-202ENST00000312481 C1QTNF6Q9BXI9 259 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 IL36GQ9NZH8 169 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 SERGEFQ9UGK8 458 aa7.83□□□□□ -1.16
COL6A5-202ENST00000312481 FFAR1O14842 300 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PLA2G10O15496 165 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 CYB5R3P00387 301 aaPredicted RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SKP2Q13309 424 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SAP30LQ9HAJ7 183 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 HCFC1R1Q9NWW0 138 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 WNT1P04628 370 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 CEACAM3P40198 252 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SLC25A35Q3KQZ1 300 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 FAM209BQ5JX69 171 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 ETFBKMTQ8IXQ9 262 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 OR51E1Q8TCB6 317 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TRAPPC1Q9Y5R8 145 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 ARHGAP32A7KAX9 2087 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 HNRNPA3P51991 378 aaKnown RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TIAL1Q01085 375 aaKnown RBP eCLIP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SSPNQ14714 243 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PHLDA2Q53GA4 152 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 OR6C1Q96RD1 312 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM191AQ9H0A3 160 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 A6NCN8 305 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 RBM45Q8IUH3 476 aaKnown RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 OR5C1Q8NGR4 320 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 DECR2Q9NUI1 292 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PCNX3Q9H6A9 2034 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 FAM171A2A8MVW0 826 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 BCL2P10415 239 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 ZADH2Q8N4Q0 377 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 AQP3Q92482 292 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM30AQ9NV96 361 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 DXOO77932 396 aaKnown RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 HOXC5Q00444 222 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF273Q14593 569 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PRSS36Q5K4E3 855 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 COL5A1-AS1Q5SY13 56 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 BCL2L2Q92843 193 aaPredicted RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 NOTCH4Q99466 2003 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PVRP15151 417 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 KRTDAPP60985 99 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SLC38A11Q08AI6 406 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 FAM27BQ5VT28 67 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM182Q6ZP80 229 aaPredicted RBP7.82□□□□□ -1.16
COL6A5-202ENST00000312481 SMIM3Q9BZL3 60 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 ST6GALNAC2Q9UJ37 374 aa7.82□□□□□ -1.16
COL6A5-202ENST00000312481 PTP4A3O75365 173 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 CA3P07451 260 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 NMBP08949 121 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TMIGD3P0DMS9 266 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM33P57088 247 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 ERVFC1-1P60608 527 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 BSXQ3C1V8 233 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 SPNS2Q8IVW8 549 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TM4SF19Q96DZ7 209 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 GALNT14Q96FL9 552 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 ESRP2Q9H6T0 727 aaKnown RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 OR2V2Q96R30 315 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 NXF5Q9H1B4 397 aaKnown RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TIMM8BQ9Y5J9 83 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 PRR14LQ5THK1 2151 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 NME2P1O60361 137 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 NQO2P16083 231 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 DMWDQ09019 674 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 ABHD5Q8WTS1 349 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM231Q9H6L2 316 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 CCL26Q9Y258 94 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 VSIG4Q9Y279 399 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 A0A0B4J203 849 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF793Q6ZN11 406 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms