RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 DEGS1O15121 323 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 RGS9O75916 674 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-201ENST00000309422 IGKV1D-12P01611 117 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 IGHV4-38-2P0DP08 117 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 IGFBP3P17936 291 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-201ENST00000309422 DUSP1P28562 367 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 MAP2K4P45985 399 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 IL13RA2Q14627 380 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 GLT8D1Q68CQ7 371 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 CEACAM19Q7Z692 300 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 TRAPPC6BQ86SZ2 158 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 OR4M1Q8NGD0 313 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 PHYHIPQ92561 330 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 ZDHHC16Q969W1 377 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 FOXRED1Q96CU9 486 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-201ENST00000309422 NR1H4Q96RI1 486 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-201ENST00000309422 SIRPDQ9H106 197 aa16.35■□□□□ 0.21
VEGFB-201ENST00000309422 RNF212BA8MTL3 300 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 TRIM77I1YAP6 450 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 OR2H2O95918 312 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 CPEP16870 476 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 SERPINA2P20848 420 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 TPBGQ13641 420 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 ELP2Q6IA86 826 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 C1orf122Q6ZSJ8 110 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 LINC00596Q86U02 117 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 TMEM203Q969S6 136 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 ORAI1Q96D31 301 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 TBX15Q96SF7 602 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 UQCC2Q9BRT2 126 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 CHST6Q9GZX3 395 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 ACOT13Q9NPJ3 140 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 SIRT7Q9NRC8 400 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 C19orf12Q9NSK7 152 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 IL36GQ9NZH8 169 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 IL36RNQ9UBH0 155 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 ZNF69Q9UC07 566 aa16.34■□□□□ 0.21
VEGFB-201ENST00000309422 MRPS28Q9Y2Q9 187 aaKnown RBP16.34■□□□□ 0.21
VEGFB-201ENST00000309422 TRAV8-7A0A075B6U6 113 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 ZNF737O75373 536 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 GTF2F2P13984 249 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 MMP9P14780 707 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 GABRA5P31644 462 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 ERVFRD-1P60508 538 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 MEF2CQ06413 473 aaPredicted RBP16.33■□□□□ 0.2
VEGFB-201ENST00000309422 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 KLF17Q5JT82 389 aaPredicted RBP16.33■□□□□ 0.2
VEGFB-201ENST00000309422 ASPHD2Q6ICH7 369 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 OSR2Q8N2R0 312 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 MUL1Q969V5 352 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 ZMAT3Q9HA38 289 aaKnown RBP16.33■□□□□ 0.2
VEGFB-201ENST00000309422 VCX3AQ9NNX9 186 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 FAM96BQ9Y3D0 163 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 SVEP1Q4LDE5 3571 aa16.33■□□□□ 0.2
VEGFB-201ENST00000309422 IGHV1-69DA0A0B4J2H0 117 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 H3BUI4 141 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 FCN3O75636 299 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 CDRT1O95170 752 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 IGHV1-69P01742 117 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 PSMB9P28065 219 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 HILS1P60008 231 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 PAN3Q58A45 887 aaKnown RBP16.32■□□□□ 0.2
VEGFB-201ENST00000309422 BRD3OSQ6XYD6 125 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 C9orf139Q6ZV77 190 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 OR10K1Q8NGX5 313 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 ZNF714Q96N38 554 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 CST11Q9H112 138 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 GHRLQ9UBU3 117 aa16.32■□□□□ 0.2
VEGFB-201ENST00000309422 JMJD1CQ15652 2540 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 TRGV10A0A0A0MS01 117 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 OR7C1O76099 320 aaPredicted RBP16.31■□□□□ 0.2
VEGFB-201ENST00000309422 PAHP00439 452 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 UBBP0CG47 229 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 P2RX3P56373 397 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 GLIPR1L1Q6UWM5 242 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 PDZD9Q8IXQ8 264 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 SIGLECL1Q8N7X8 197 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 MRPS24Q96EL2 167 aaKnown RBP16.31■□□□□ 0.2
VEGFB-201ENST00000309422 PPA2Q9H2U2 334 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 GAL3ST2Q9H3Q3 398 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 HEXA-AS1Q9H8Q6 139 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 SPACA1Q9HBV2 294 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 ST3GAL6Q9Y274 331 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 SF3B6Q9Y3B4 125 aaKnown RBP16.31■□□□□ 0.2
VEGFB-201ENST00000309422 LRRC42Q9Y546 428 aa16.31■□□□□ 0.2
VEGFB-201ENST00000309422 TMEM82A0PJX8 343 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 PRTN3P24158 256 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 MYL9P24844 172 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 KCNJ3P48549 501 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 RPS25P62851 125 aaKnown RBP16.3■□□□□ 0.2
VEGFB-201ENST00000309422 BAMBIQ13145 260 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 MPV17LQ2QL34 196 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 METAP1DQ6UB28 335 aaPredicted RBP16.3■□□□□ 0.2
VEGFB-201ENST00000309422 PHC2Q8IXK0 858 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 OR51T1Q8NGJ9 327 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 NEK7Q8TDX7 302 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 ZFAND2BQ8WV99 257 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 BARHL1Q9BZE3 327 aa16.3■□□□□ 0.2
VEGFB-201ENST00000309422 LINC00312Q9Y6C7 94 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms