RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 A0A087WZY1 265 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 CD63P08962 238 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 MDKP21741 143 aaPredicted RBP9.71□□□□□ -0.85
PTPN7-201ENST00000309017 MALLQ13021 153 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 PLPPR5Q32ZL2 321 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 C1QL4Q86Z23 238 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 ZNF441Q8N8Z8 693 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 INTS12Q96CB8 462 aaKnown RBP9.71□□□□□ -0.85
PTPN7-201ENST00000309017 MARS2Q96GW9 593 aaKnown RBP9.71□□□□□ -0.85
PTPN7-201ENST00000309017 TM2D1Q9BX74 207 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 ULBP2Q9BZM5 246 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 ARV1Q9H2C2 271 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 ST3GAL6Q9Y274 331 aa9.71□□□□□ -0.85
PTPN7-201ENST00000309017 RRP8O43159 456 aaKnown RBP9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 CCL1P22362 96 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 AADACP22760 399 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 RPS18P62269 152 aaKnown RBP9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 TLE4Q04727 773 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
PTPN7-201ENST00000309017 RAET1LQ5VY80 246 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 C1orf87Q8N0U7 546 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 TSTD1Q8NFU3 115 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 OR5L2Q8NGL0 311 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 NTNG2Q96CW9 530 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 BOD1Q96IK1 185 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 FAM210BQ96KR6 192 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 PNRC2Q9NPJ4 139 aaKnown RBP9.71□□□□□ -0.86
PTPN7-201ENST00000309017 KIAA1456Q9P272 454 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 TMEM131Q92545 1883 aa9.71□□□□□ -0.86
PTPN7-201ENST00000309017 TRANK1O15050 2925 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 RBP2P50120 134 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 DYNLT3P51808 116 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 ERVFRD-1P60508 538 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 ELOBQ15370 118 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 CNN3Q15417 329 aaKnown RBP9.7□□□□□ -0.86
PTPN7-201ENST00000309017 C9orf50Q5SZB4 431 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 HIST2H3PS2Q5TEC6 136 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SNX22Q96L94 193 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SSX3Q99909 188 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SCRT1Q9BWW7 348 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 PLEKHF2Q9H8W4 249 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 ZDHHC8Q9ULC8 765 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 A0A087X0M5 115 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 C3orf85A0A1B0GTC6 90 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 A0A1B0GX30 115 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 IGSF23A1L1A6 192 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 OR5H1A6NKK0 313 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 PHOX2AO14813 284 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 ADAM20O43506 726 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 KHDC3LQ587J8 217 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 TP53RKQ96S44 253 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SPTAN1Q13813 2472 aaKnown RBP9.7□□□□□ -0.86
PTPN7-201ENST00000309017 BTBD17A6NE02 478 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 H3BMH7 237 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 HSPB6O14558 160 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SCAF4O95104 1147 aaKnown RBP9.7□□□□□ -0.86
PTPN7-201ENST00000309017 IFNA5P01569 189 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 HLA-HP01893 362 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SRP19P09132 144 aaKnown RBP9.7□□□□□ -0.86
PTPN7-201ENST00000309017 ALDH3B1P43353 468 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 HNRNPKP61978 463 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN7-201ENST00000309017 SHBQ15464 509 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 LCN15Q6UWW0 184 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 PIGCQ92535 297 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 DEFB126Q9BYW3 111 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 PISDQ9UG56 409 aa9.7□□□□□ -0.86
PTPN7-201ENST00000309017 G3V3Y1 287 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 HBE1P02100 147 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 FOSL2P15408 326 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 MSX1P28360 303 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 SSTP61278 116 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 MRPS34P82930 218 aaKnown RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 DLX2Q07687 328 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 SSX2Q16385 188 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 SNAI3Q3KNW1 292 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 THNSL2Q86YJ6 484 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 GNPNAT1Q96EK6 184 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 CDCA3Q99618 268 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 HS3ST3B1Q9Y662 390 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 GPR179Q6PRD1 2367 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 ZNF705GA8MUZ8 300 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-201ENST00000309017 SOD3P08294 240 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 TRGC1P0CF51 173 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 HYAL1Q12794 435 aa9.69□□□□□ -0.86
PTPN7-201ENST00000309017 ZNF154Q13106 437 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms