RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 ABHD3Q8WU67 409 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 AQP3Q92482 292 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 FOXB1Q99853 325 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 ZFHX4Q86UP3 3567 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 C5orf63A6NC05 138 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 E5RGE8 158 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 NOVA1P51513 510 aaKnown RBP12.29□□□□□ -0.44
SDC2-201ENST00000302190 C1orf100Q5SVJ3 147 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 NCMAPQ5T1S8 102 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 HIST2H3PS2Q5TEC6 136 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 ZNF709Q8N972 641 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 APCDD1LQ8NCL9 501 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 PP6455Q8WZ26 134 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 THOC3Q96J01 351 aaKnown RBP12.29□□□□□ -0.44
SDC2-201ENST00000302190 B4GALT7Q9UBV7 327 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 CCDC187A0A096LP49 1063 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 CST4P01036 141 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 LPAR6P43657 344 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 NKX6-1P78426 367 aaPredicted RBP12.29□□□□□ -0.44
SDC2-201ENST00000302190 UBE2V2Q15819 145 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 C3AR1Q16581 482 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 SPANXN5Q5MJ07 72 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 OR56B2PQ8NGI1 322 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 OR6X1Q8NH79 312 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 KPTNQ9Y664 436 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 FRYQ5TBA9 3013 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 CLDN1O95832 211 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 BMP5P22003 454 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 CALCRP30988 508 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 TMEM50BP56557 158 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 SNAI3Q3KNW1 292 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 GTF3AQ92664 365 aaKnown RBP12.29□□□□□ -0.44
SDC2-201ENST00000302190 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 TOLLIPQ9H0E2 274 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 GPR132Q9UNW8 380 aa12.29□□□□□ -0.44
SDC2-201ENST00000302190 K7ESF4 209 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 SIRPB1O00241 398 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 APLNRP35414 380 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 DHRS7BQ6IAN0 325 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 HOGA1Q86XE5 327 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 PAQR4Q8N4S7 273 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 EXTL1Q92935 676 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 PHYHIPLQ96FC7 376 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 PRR19A6NJB7 356 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 VAMP5O95183 116 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 ARG2P78540 354 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 ZNF705GA8MUZ8 300 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 TSTD3H0UI37 97 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 THBS4P35443 961 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 DUSP3P51452 185 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 PCBD1P61457 104 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 SPINK14Q6IE38 97 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 OR2M3Q8NG83 312 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 OR5C1Q8NGR4 320 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 FRZBQ92765 325 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 RBMXL1Q96E39 390 aaKnown RBP12.28□□□□□ -0.44
SDC2-201ENST00000302190 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 CLDN16Q9Y5I7 305 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 DMRT1Q9Y5R6 373 aa12.28□□□□□ -0.44
SDC2-201ENST00000302190 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 NDUFB7P17568 137 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 FSTP19883 344 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.44
SDC2-201ENST00000302190 CFHR1Q03591 330 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 FNDC7Q5VTL7 733 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 NRIP2Q9BQI9 281 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 NIPSNAP3BQ9BS92 247 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 DEFB127Q9H1M4 99 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 OBP2BQ9NPH6 170 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 TREM2Q9NZC2 230 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 EML5Q05BV3 1969 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.44
SDC2-201ENST00000302190 A0A0J9YW62 118 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 ZNF732B4DXR9 585 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 H0YIZ8 118 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 ADAM20O43506 726 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 TRAF3IP2O43734 574 aaPredicted RBP12.27□□□□□ -0.45
SDC2-201ENST00000302190 SFTPCP11686 197 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 MLF1P58340 268 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 IZUMO4Q1ZYL8 232 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 WDR5BQ86VZ2 330 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 ZNF488Q96MN9 340 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 TMPRSS5Q9H3S3 457 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 C19orf12Q9NSK7 152 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms