RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF107Q9UII5 783 aaPredicted RBP18.97■□□□□ 0.63
TPM4-201ENST00000300933 C5orf49A4QMS7 147 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 RCC1P18754 421 aaPredicted RBP18.96■□□□□ 0.63
TPM4-201ENST00000300933 PIGYQ3MUY2 71 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 FER1L6-AS2Q96M78 137 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 SULT4A1Q9BR01 284 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 RSRP1Q9BUV0 290 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 GHRLQ9UBU3 117 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 TINAGQ9UJW2 476 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 IGKV1-12A0A0C4DH73 117 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 IGKV1D-12P01611 117 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 RD3LP0DJH9 198 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 BORCS8Q96FH0 119 aa18.96■□□□□ 0.63
TPM4-201ENST00000300933 PARP12Q9H0J9 701 aaKnown RBP18.96■□□□□ 0.63
TPM4-201ENST00000300933 ZNF318Q5VUA4 2279 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 DBX1A6NMT0 343 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 C3orf80F5H4A9 247 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 FBXO24O75426 580 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 CSTBP04080 98 aaKnown RBP18.95■□□□□ 0.62
TPM4-201ENST00000300933 S100A8P05109 93 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 DHRS11Q6UWP2 260 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 MDS2Q8NDY4 140 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 OR5H2Q8NGV7 314 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 TERB2Q8NHR7 220 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 HIST1H2BAQ96A08 127 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 PRSS50Q9UI38 385 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 AKAP13Q12802 2813 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 OPRM1P35372 400 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 OR3A2P47893 321 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 CCL11P51671 97 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 PNLIPRP3Q17RR3 467 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 NMES1Q9C002 83 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 EHFQ9NZC4 300 aa18.95■□□□□ 0.62
TPM4-201ENST00000300933 RP1L1Q8IWN7 2480 aaPredicted RBP18.95■□□□□ 0.62
TPM4-201ENST00000300933 FOXI3A8MTJ6 420 aaPredicted RBP18.94■□□□□ 0.62
TPM4-201ENST00000300933 NME2P1O60361 137 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 PCBD1P61457 104 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 SLC10A1Q14973 349 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 KRBOX4Q5JUW0 171 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 PLCXD3Q63HM9 321 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 RPL7L1Q6DKI1 246 aaKnown RBP18.94■□□□□ 0.62
TPM4-201ENST00000300933 GSKIPQ9P0R6 139 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 NBEAQ8NFP9 2946 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 IGKV3D-15A0A087WSY6 115 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 hCG_38984A0A1B0GV85 526 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 ZNF850A8MQ14 1090 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 MSTNO14793 375 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 NGFP01138 241 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 SFTPBP07988 381 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 DAOP14920 347 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 HOGA1Q86XE5 327 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 OR13G1Q8NGZ3 307 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 OCSTAMPQ9BR26 566 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 C20orf24Q9BUV8 137 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 C5orf66Q9H5L9 145 aa18.94■□□□□ 0.62
TPM4-201ENST00000300933 TRBV6-7A0A0A0MS04 114 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 UBE2CO00762 179 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 GEMIN2O14893 280 aaKnown RBP18.93■□□□□ 0.62
TPM4-201ENST00000300933 FTH1P19P0C7X4 201 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 ZNF14P17017 642 aaPredicted RBP18.93■□□□□ 0.62
TPM4-201ENST00000300933 RBP2P50120 134 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 S100A10P60903 97 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 SECTM1Q8WVN6 248 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 RNF122Q9H9V4 155 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 MED12LQ86YW9 2145 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 DHRS7CA6NNS2 312 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 KLRC4-KLRK1H3BQV0 150 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 WT1P19544 449 aaPredicted RBP18.93■□□□□ 0.62
TPM4-201ENST00000300933 GLRA1P23415 457 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 ALDH3B1P43353 468 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 IGFBP7Q16270 282 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 Q6ZSR3 168 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 CALHM1Q8IU99 346 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 ZNF100Q8IYN0 542 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 APH1AQ96BI3 265 aa18.93■□□□□ 0.62
TPM4-201ENST00000300933 NUDT16L1Q9BRJ7 211 aaKnown RBP18.93■□□□□ 0.62
TPM4-201ENST00000300933 SHANK1Q9Y566 2161 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 A6NLC8 198 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 NDUFS6O75380 124 aaKnown RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 SNRNP70P08621 437 aaKnown RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 KRTAP27-1Q3LI81 207 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 HIKESHIQ53FT3 197 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 MCEMP1Q8IX19 187 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 C15orf54Q8N8G6 183 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 TMEM45BQ96B21 275 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 SMIM8Q96KF7 97 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 Q96M66 194 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 METTL9Q9H1A3 318 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 METTL8Q9H825 291 aaKnown RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 KLF13Q9Y2Y9 288 aaPredicted RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 FOLR2P14207 255 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 CYCSP99999 105 aaKnown RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 RAB32Q13637 225 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 TSC22D1Q15714 1073 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 ZNF766Q5HY98 468 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 FAHD2BQ6P2I3 314 aaPredicted RBP18.92■□□□□ 0.62
TPM4-201ENST00000300933 FBXL14Q8N1E6 418 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 EDARADDQ8WWZ3 215 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 FAHD2AQ96GK7 314 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 OR10C1Q96KK4 312 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms