RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CPEB3Q8NE35 698 aaKnown RBP11.16□□□□□ -0.62
HIF3A-204ENST00000300862 CT55Q8WUE5 264 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 C14orf79Q96F83 325 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 ADGRG7Q96K78 797 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 EGLN1Q9GZT9 426 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 NECAP2Q9NVZ3 263 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 FBXL17Q9UF56 701 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 XRCC2O43543 280 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 CA11O75493 328 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 CER1O95813 267 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 CD5P06127 495 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 CELA3AP09093 270 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 ZNF44P15621 663 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 PAX6P26367 422 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 NPBWR2P48146 333 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 PPT1P50897 306 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 PPA1Q15181 289 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 KCNE4Q8WWG9 221 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
HIF3A-204ENST00000300862 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
HIF3A-204ENST00000300862 IFNA21P01568 189 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 TMEM33P57088 247 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 DCAF12Q5T6F0 453 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 RTL6Q6ICC9 239 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 DHRS11Q6UWP2 260 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 LHFPL2Q6ZUX7 228 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 ERGIC1Q969X5 290 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-204ENST00000300862 HES7Q9BYE0 225 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 PCSK5Q92824 1860 aa11.15□□□□□ -0.62
HIF3A-204ENST00000300862 DEDDO75618 318 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 OR7C1O76099 320 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-204ENST00000300862 S100A8P05109 93 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 CD80P33681 288 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 CYB561P49447 251 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-204ENST00000300862 TGIF1Q15583 401 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 TMEM42Q69YG0 159 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 SLC25A26Q70HW3 274 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 PRRX2Q99811 253 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-204ENST00000300862 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 CRIM1Q9NZV1 1036 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 TINAGQ9UJW2 476 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 HSF4Q9ULV5 492 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 LOXL2Q9Y4K0 774 aa11.15□□□□□ -0.63
HIF3A-204ENST00000300862 TERTO14746 1132 aaKnown RBP11.14□□□□□ -0.63
HIF3A-204ENST00000300862 DNPH1O43598 174 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 MBPP02686 304 aaPredicted RBP11.14□□□□□ -0.63
HIF3A-204ENST00000300862 EIF2S3LQ2VIR3 472 aaKnown RBP11.14□□□□□ -0.63
HIF3A-204ENST00000300862 NSUN5P2Q63ZY6 315 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF442Q9H7R0 627 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 BCO1Q9HAY6 547 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 NIT2Q9NQR4 276 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 SLC2A9Q9NRM0 540 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 AMDHD2Q9Y303 409 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 TMEM187Q14656 261 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 SMCO1Q147U7 214 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 DAZAP2Q15038 168 aaPredicted RBP11.14□□□□□ -0.63
HIF3A-204ENST00000300862 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 PSMF1Q92530 271 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 GPHA2Q96T91 129 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 NAA60Q9H7X0 242 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 DECR2Q9NUI1 292 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 LRFN1Q9P244 771 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 KCNIP3Q9Y2W7 256 aa11.14□□□□□ -0.63
HIF3A-204ENST00000300862 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 HSPB6O14558 160 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 HLA-HP01893 362 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 MMP7P09237 267 aaPredicted RBP11.13□□□□□ -0.63
HIF3A-204ENST00000300862 DTYMKP23919 212 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 FOXO1Q12778 655 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 C6orf15Q6UXA7 325 aaPredicted RBP11.13□□□□□ -0.63
HIF3A-204ENST00000300862 ASCL4Q6XD76 172 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 THOC3Q96J01 351 aaKnown RBP11.13□□□□□ -0.63
HIF3A-204ENST00000300862 SLC7A10Q9NS82 523 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 TUBD1Q9UJT1 453 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
HIF3A-204ENST00000300862 AGAP20933 346 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 ECI1P42126 302 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 FUT6P51993 359 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 GFRA1P56159 465 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 MALLQ13021 153 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 MEX3BQ6ZN04 569 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms